| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is adhA_1
Identifier: 41407669
GI number: 41407669
Start: 1724813
End: 1725844
Strand: Direct
Name: adhA_1
Synonym: MAP1571
Alternate gene names: 41407669
Gene position: 1724813-1725844 (Clockwise)
Preceding gene: 41407668
Following gene: 41407674
Centisome position: 35.71
GC content: 72.67
Gene sequence:
>1032_bases GTGATGTCTTCTCCGGTGACCACCACGGCGATGCGCGCCTGGAGGGTGCGTCGGCCCGGTCCGATGGACACTCATCCGCT CGAGGAAGTGACCACCGAGGTGCCGCGCCCCGGGCCGTCCGACCTGCTGGTCGCGGTGCGTGCGTGCGGCGTGTGCCGCA CCGATCTGCATGTCACCGAGGGCGACCTACCCGTGCACCGCGACCGGGTCACGCCCGGTCATGAGGTGGCCGGCGAGGTC ATCGAAGTCGGCGCCGAGGCCGGCGACGAGTTCGGCGTCGGGGACCGGGTGGGCATCGCCTGGCTGCGCCACACCTGCGG GGTGTGCAAATACTGCCGGCGCGGCGACGAGAACCTGTGCCCCGAGTCCCGCTACACCGGCTGGGACGCCGACGGCGGAT ACGCCGAATTCGCGACCGTGCCAGCGGCTTTCGCGCACCCACTGCCCGGCGGTTATAGCGACAGCGAGCTCGCGCCGCTG CTGTGTGCGGGCATCATCGGCTACCGGGCGCTGCTGCGCGCCCAGCTACCGCCGGGCGGACGGTTGGGCCTGTACGGTTT CGGCGGCAGCGCGCACATCACCGCGCAGGTCGCCCTGGCGCAGGGCGCCGAGGTGCACGTGATGACCCGCGGGGACCGGG CCCGCGAGCTGGCGATCGAACTCGGCGCCGCCTCCGCGCAGGGCGCCGCCGACCCGCCGCCCGTCCCGCTGGACGCCGCC ATCCTGTTCGCCCCGGTCGGCGATCTGGTACTGCCCGCGCTGGCGGCGCTGGACCGCGGCGGCACCCTGGCGATCGCCGG CATTCACCTGTCCGACATCCCGTCGCTGAACTACCAGCGCCACCTGTTCCAGGAGCGCCAGGTGCGTTCGGTCACCTCCA ACACCCGGGCCGACGCGCGGGCCTTCCTCGACTTCGCGGGCACGCATCACATCAGCGTCACCACGCCGGAATATCCCCTC GGACAAGCGGATCGGGCGCTGGCGGATCTGAGCGCCGGGCGCATCGCCGGTGCGGCGGTGCTGCTGGTCTGA
Upstream 100 bases:
>100_bases CGCTGCTCGGTTCGGTGATCCTGCTCTGGATCGTCGGCATGGTGCGCAGGACGTAATCGCCTTAACCCGTTGCGGCCGTG GTGGTTAGCGGCATGATGGG
Downstream 100 bases:
>100_bases GCGGCCTCGGCCCTCAGGTGGACAGATGCCAGACGAACGCGGCCGCCAGCGCACCGAGCCCGTTCAGTGACCAGTGCAGA GCGATGGGCGCGATCAGGCT
Product: AdhA_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MMSSPVTTTAMRAWRVRRPGPMDTHPLEEVTTEVPRPGPSDLLVAVRACGVCRTDLHVTEGDLPVHRDRVTPGHEVAGEV IEVGAEAGDEFGVGDRVGIAWLRHTCGVCKYCRRGDENLCPESRYTGWDADGGYAEFATVPAAFAHPLPGGYSDSELAPL LCAGIIGYRALLRAQLPPGGRLGLYGFGGSAHITAQVALAQGAEVHVMTRGDRARELAIELGAASAQGAADPPPVPLDAA ILFAPVGDLVLPALAALDRGGTLAIAGIHLSDIPSLNYQRHLFQERQVRSVTSNTRADARAFLDFAGTHHISVTTPEYPL GQADRALADLSAGRIAGAAVLLV
Sequences:
>Translated_343_residues MMSSPVTTTAMRAWRVRRPGPMDTHPLEEVTTEVPRPGPSDLLVAVRACGVCRTDLHVTEGDLPVHRDRVTPGHEVAGEV IEVGAEAGDEFGVGDRVGIAWLRHTCGVCKYCRRGDENLCPESRYTGWDADGGYAEFATVPAAFAHPLPGGYSDSELAPL LCAGIIGYRALLRAQLPPGGRLGLYGFGGSAHITAQVALAQGAEVHVMTRGDRARELAIELGAASAQGAADPPPVPLDAA ILFAPVGDLVLPALAALDRGGTLAIAGIHLSDIPSLNYQRHLFQERQVRSVTSNTRADARAFLDFAGTHHISVTTPEYPL GQADRALADLSAGRIAGAAVLLV >Mature_343_residues MMSSPVTTTAMRAWRVRRPGPMDTHPLEEVTTEVPRPGPSDLLVAVRACGVCRTDLHVTEGDLPVHRDRVTPGHEVAGEV IEVGAEAGDEFGVGDRVGIAWLRHTCGVCKYCRRGDENLCPESRYTGWDADGGYAEFATVPAAFAHPLPGGYSDSELAPL LCAGIIGYRALLRAQLPPGGRLGLYGFGGSAHITAQVALAQGAEVHVMTRGDRARELAIELGAASAQGAADPPPVPLDAA ILFAPVGDLVLPALAALDRGGTLAIAGIHLSDIPSLNYQRHLFQERQVRSVTSNTRADARAFLDFAGTHHISVTTPEYPL GQADRALADLSAGRIAGAAVLLV
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI87081918, Length=312, Percent_Identity=29.1666666666667, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87082401, Length=304, Percent_Identity=27.3026315789474, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1786518, Length=309, Percent_Identity=28.4789644012945, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1790045, Length=276, Percent_Identity=30.0724637681159, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI226510992, Length=156, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788073, Length=258, Percent_Identity=28.2945736434109, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787863, Length=225, Percent_Identity=28.8888888888889, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1788075, Length=212, Percent_Identity=27.3584905660377, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87082125, Length=193, Percent_Identity=27.979274611399, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71988145, Length=318, Percent_Identity=26.1006289308176, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562582, Length=331, Percent_Identity=26.5861027190332, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562584, Length=298, Percent_Identity=28.5234899328859, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17562876, Length=209, Percent_Identity=33.4928229665072, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17562878, Length=195, Percent_Identity=31.2820512820513, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6319621, Length=344, Percent_Identity=31.3953488372093, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323961, Length=352, Percent_Identity=30.3977272727273, Blast_Score=132, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6323729, Length=320, Percent_Identity=28.4375, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6324486, Length=248, Percent_Identity=33.8709677419355, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323980, Length=190, Percent_Identity=32.6315789473684, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319949, Length=199, Percent_Identity=34.6733668341709, Blast_Score=102, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR014187 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 36107; Mature: 36107
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSSPVTTTAMRAWRVRRPGPMDTHPLEEVTTEVPRPGPSDLLVAVRACGVCRTDLHVTE CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEECCCEEEC GDLPVHRDRVTPGHEVAGEVIEVGAEAGDEFGVGDRVGIAWLRHTCGVCKYCRRGDENLC CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PESRYTGWDADGGYAEFATVPAAFAHPLPGGYSDSELAPLLCAGIIGYRALLRAQLPPGG CCCCCCCCCCCCCEEHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC RLGLYGFGGSAHITAQVALAQGAEVHVMTRGDRARELAIELGAASAQGAADPPPVPLDAA CEEEEEECCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHH ILFAPVGDLVLPALAALDRGGTLAIAGIHLSDIPSLNYQRHLFQERQVRSVTSNTRADAR HHHHCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH AFLDFAGTHHISVTTPEYPLGQADRALADLSAGRIAGAAVLLV HHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MMSSPVTTTAMRAWRVRRPGPMDTHPLEEVTTEVPRPGPSDLLVAVRACGVCRTDLHVTE CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCEECCCEEEC GDLPVHRDRVTPGHEVAGEVIEVGAEAGDEFGVGDRVGIAWLRHTCGVCKYCRRGDENLC CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC PESRYTGWDADGGYAEFATVPAAFAHPLPGGYSDSELAPLLCAGIIGYRALLRAQLPPGG CCCCCCCCCCCCCEEHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC RLGLYGFGGSAHITAQVALAQGAEVHVMTRGDRARELAIELGAASAQGAADPPPVPLDAA CEEEEEECCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHH ILFAPVGDLVLPALAALDRGGTLAIAGIHLSDIPSLNYQRHLFQERQVRSVTSNTRADAR HHHHCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH AFLDFAGTHHISVTTPEYPLGQADRALADLSAGRIAGAAVLLV HHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]