Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407668

Identifier: 41407668

GI number: 41407668

Start: 1724469

End: 1724768

Strand: Direct

Name: 41407668

Synonym: MAP1570

Alternate gene names: NA

Gene position: 1724469-1724768 (Clockwise)

Preceding gene: 41407667

Following gene: 41407669

Centisome position: 35.7

GC content: 65.0

Gene sequence:

>300_bases
ATGGACGTCACTGCTGCCACCGAATACCTGGCCCGCTCCACCACGCTGACCAGCGTCGGCATCATCGGCTACATCATCAT
CGGCGGCCTGGCCGGTGCCCTGGCCAGCAAGATCGTCCGGGGCAGCGGCGCCGGCATCCTGATGGACATCGTGATCGGCA
TCGTCGGCGCGCTGATCGGCGGCTTCATCCTGAGCTTCTTCGTCAACACCGCGGGCGGCGGGCTCATCTTCACCTTCTTC
ACCGCGCTGCTCGGTTCGGTGATCCTGCTCTGGATCGTCGGCATGGTGCGCAGGACGTAA

Upstream 100 bases:

>100_bases
CGTCGCCGATTCGTCACTCGATTCGTGACCCAAACTGGGTATACCGAAGTGACGGCCCAGCAAACAGCTGGGCTTTGCCA
GCGATTGCGAGGAGATCCTC

Downstream 100 bases:

>100_bases
TCGCCTTAACCCGTTGCGGCCGTGGTGGTTAGCGGCATGATGGGGTGATGTCTTCTCCGGTGACCACCACGGCGATGCGC
GCCTGGAGGGTGCGTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transglycosylase-Associated Protein

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIGGFILSFFVNTAGGGLIFTFF
TALLGSVILLWIVGMVRRT

Sequences:

>Translated_99_residues
MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIGGFILSFFVNTAGGGLIFTFF
TALLGSVILLWIVGMVRRT
>Mature_99_residues
MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIGGFILSFFVNTAGGGLIFTFF
TALLGSVILLWIVGMVRRT

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10094; Mature: 10094

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GFILSFFVNTAGGGLIFTFFTALLGSVILLWIVGMVRRT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GFILSFFVNTAGGGLIFTFFTALLGSVILLWIVGMVRRT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA