| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407668
Identifier: 41407668
GI number: 41407668
Start: 1724469
End: 1724768
Strand: Direct
Name: 41407668
Synonym: MAP1570
Alternate gene names: NA
Gene position: 1724469-1724768 (Clockwise)
Preceding gene: 41407667
Following gene: 41407669
Centisome position: 35.7
GC content: 65.0
Gene sequence:
>300_bases ATGGACGTCACTGCTGCCACCGAATACCTGGCCCGCTCCACCACGCTGACCAGCGTCGGCATCATCGGCTACATCATCAT CGGCGGCCTGGCCGGTGCCCTGGCCAGCAAGATCGTCCGGGGCAGCGGCGCCGGCATCCTGATGGACATCGTGATCGGCA TCGTCGGCGCGCTGATCGGCGGCTTCATCCTGAGCTTCTTCGTCAACACCGCGGGCGGCGGGCTCATCTTCACCTTCTTC ACCGCGCTGCTCGGTTCGGTGATCCTGCTCTGGATCGTCGGCATGGTGCGCAGGACGTAA
Upstream 100 bases:
>100_bases CGTCGCCGATTCGTCACTCGATTCGTGACCCAAACTGGGTATACCGAAGTGACGGCCCAGCAAACAGCTGGGCTTTGCCA GCGATTGCGAGGAGATCCTC
Downstream 100 bases:
>100_bases TCGCCTTAACCCGTTGCGGCCGTGGTGGTTAGCGGCATGATGGGGTGATGTCTTCTCCGGTGACCACCACGGCGATGCGC GCCTGGAGGGTGCGTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase-Associated Protein
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIGGFILSFFVNTAGGGLIFTFF TALLGSVILLWIVGMVRRT
Sequences:
>Translated_99_residues MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIGGFILSFFVNTAGGGLIFTFF TALLGSVILLWIVGMVRRT >Mature_99_residues MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIGGFILSFFVNTAGGGLIFTFF TALLGSVILLWIVGMVRRT
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10094; Mature: 10094
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GFILSFFVNTAGGGLIFTFFTALLGSVILLWIVGMVRRT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDVTAATEYLARSTTLTSVGIIGYIIIGGLAGALASKIVRGSGAGILMDIVIGIVGALIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GFILSFFVNTAGGGLIFTFFTALLGSVILLWIVGMVRRT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA