Click here to switch to the map view.

The map label for this gene is ydiI [C]

Identifier: 41407658

GI number: 41407658

Start: 1714377

End: 1714799

Strand: Direct

Name: ydiI [C]

Synonym: MAP1560

Alternate gene names: 41407658

Gene position: 1714377-1714799 (Clockwise)

Preceding gene: 41407650

Following gene: 41407663

Centisome position: 35.5

GC content: 65.96

Gene sequence:

>423_bases
GTGTCAGAGCCGCAGGAAGCGATCATCCCGCCCGACTTTTCCGCACCCTTCGACCGCGAGATCGGGCTGCAGTTCACCGA
ACTCAGCCCCGACGGCGCCCGCGCCCGGCTCGAAGTCACCCCGAAGTTGTTGCAGCCCATGGGACTCGTCCACGGCGGCG
TCTACTGCTCGATGATCGAAAGCATGGCCAGTGTGGCCGCCTACACCTGGCTGGCCACCCGCGGCGGCGGGAATGTGGTG
GGGGTCAACAACAACACCGACTTCTTGCGTTCCATCGGCTCGGGCACGGTGTACGGCGTGGTCGAGCCCATCCACCGGGG
CCGCAGCCAGCAGCTGTGGTTGGTCACCATCACCGACGACGACGACCGCGTCGTCGCCCGAGGCCAAGTGCGGCTGCAGA
ATCTCGAGGTTCGCAATACCTGA

Upstream 100 bases:

>100_bases
GTGCCCTGTGCACGGGGCTCAGCCGTTTCTGGGGCCGGTATCGGCGACATCGCCGTCCCGCCGCGCCGGCCCGCCCGGGC
GATGGTGTAGACACGGGAGC

Downstream 100 bases:

>100_bases
TCGGCGCGCGCCGAAAACCCCACGAACCATGCTGGCGGGCAACGACTTAGCCCGGGGTTCACTGAAGGCCGTTGTGCTGC
AACGGGTTTGGCCGATACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSEPQEAIIPPDFSAPFDREIGLQFTELSPDGARARLEVTPKLLQPMGLVHGGVYCSMIESMASVAAYTWLATRGGGNVV
GVNNNTDFLRSIGSGTVYGVVEPIHRGRSQQLWLVTITDDDDRVVARGQVRLQNLEVRNT

Sequences:

>Translated_140_residues
MSEPQEAIIPPDFSAPFDREIGLQFTELSPDGARARLEVTPKLLQPMGLVHGGVYCSMIESMASVAAYTWLATRGGGNVV
GVNNNTDFLRSIGSGTVYGVVEPIHRGRSQQLWLVTITDDDDRVVARGQVRLQNLEVRNT
>Mature_139_residues
SEPQEAIIPPDFSAPFDREIGLQFTELSPDGARARLEVTPKLLQPMGLVHGGVYCSMIESMASVAAYTWLATRGGGNVVG
VNNNTDFLRSIGSGTVYGVVEPIHRGRSQQLWLVTITDDDDRVVARGQVRLQNLEVRNT

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=104, Percent_Identity=36.5384615384615, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1786813, Length=104, Percent_Identity=34.6153846153846, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15299; Mature: 15167

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPQEAIIPPDFSAPFDREIGLQFTELSPDGARARLEVTPKLLQPMGLVHGGVYCSMIE
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHHCCHHHHHHH
SMASVAAYTWLATRGGGNVVGVNNNTDFLRSIGSGTVYGVVEPIHRGRSQQLWLVTITDD
HHHHHHHHHHEEECCCCCEEEECCCHHHHHHCCCCEEEEEECHHHCCCCCEEEEEEEECC
DDRVVARGQVRLQNLEVRNT
CCEEEEECEEEEEEEEECCC
>Mature Secondary Structure 
SEPQEAIIPPDFSAPFDREIGLQFTELSPDGARARLEVTPKLLQPMGLVHGGVYCSMIE
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHHCCHHHHHHH
SMASVAAYTWLATRGGGNVVGVNNNTDFLRSIGSGTVYGVVEPIHRGRSQQLWLVTITDD
HHHHHHHHHHEEECCCCCEEEECCCHHHHHHCCCCEEEEEECHHHCCCCCEEEEEEEECC
DDRVVARGQVRLQNLEVRNT
CCEEEEECEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]