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The map label for this gene is 41407641

Identifier: 41407641

GI number: 41407641

Start: 1692626

End: 1693303

Strand: Direct

Name: 41407641

Synonym: MAP1543

Alternate gene names: NA

Gene position: 1692626-1693303 (Clockwise)

Preceding gene: 41407640

Following gene: 41407642

Centisome position: 35.05

GC content: 70.06

Gene sequence:

>678_bases
TTGGAGACGCAGCCACCGACGAGAGCGCGATCGCGGGAAGGAACCACCGTGAGCGAGCAGCCACGCCAAGAGCAGCTCAA
TTTGGCCGAGGACGGGAATGCGGGCACCGGTGAGCGCAGCGTCACCGCGGCCGCCGCGCCGGTCCAGCCCGGATTGTTCC
CCGACGACTCGGTGCCCGACGAACTTGTCGGCTACCGCGGCCCGAGCGCCTGCCAGATCGCCGGCATCACCTACCGGCAG
CTGGACTACTGGGCCCGCACCTCGCTGGTGGTGCCGTCGATCCGCAGCGCGGCGGGCTCCGGCAGCCAGCGGCTCTACTC
CTTCAAAGACATCCTGGTGCTCAAGATCGTCAAGCGGCTGCTCGACACCGGTATCTCGCTGCACAACATCCGCGTGGCCG
TCGACCACCTGCGCCAGCGCGGGGTGGAGGACCTGGCCAACATCACCCTGTTCTCCGACGGCACCACCGTGTACGAGTGC
ACGTCGGCCGAGGAGGTCGTCGACCTGCTGCAGGGCGGGCAGGGCGTGTTCGGCATCGCGGTCTCCGGCGCCATGCGCGA
GCTGACCGGCGTCATCGCGGACTTCCCCGGCGAGCGGGCCGACGGCGGCGAGTCGATCGCCGAGCCGGAGGACGAGCTGG
CGTCCCGGCGCAAGCACCGCGACCGCAAGATCGGCTGA

Upstream 100 bases:

>100_bases
GCGACGGCCATACTTTGAGGACGACTTCAGGCGCGGCGGCTATCGACAAGCGTAAGCTCACTAGCACTCGGGCCTGAGCA
GACGTGGCTGCGATGCAGCC

Downstream 100 bases:

>100_bases
TCACGCCCGGCGCCGCGCGCGTGGGCGGCCGGCGCGGGCGGGTAAACTGGGCGGCGCATCGCATTCGAGCGGGAGAGTTC
CGTGACGGCCAGTCACGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
METQPPTRARSREGTTVSEQPRQEQLNLAEDGNAGTGERSVTAAAAPVQPGLFPDDSVPDELVGYRGPSACQIAGITYRQ
LDYWARTSLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVEDLANITLFSDGTTVYEC
TSAEEVVDLLQGGQGVFGIAVSGAMRELTGVIADFPGERADGGESIAEPEDELASRRKHRDRKIG

Sequences:

>Translated_225_residues
METQPPTRARSREGTTVSEQPRQEQLNLAEDGNAGTGERSVTAAAAPVQPGLFPDDSVPDELVGYRGPSACQIAGITYRQ
LDYWARTSLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVEDLANITLFSDGTTVYEC
TSAEEVVDLLQGGQGVFGIAVSGAMRELTGVIADFPGERADGGESIAEPEDELASRRKHRDRKIG
>Mature_225_residues
METQPPTRARSREGTTVSEQPRQEQLNLAEDGNAGTGERSVTAAAAPVQPGLFPDDSVPDELVGYRGPSACQIAGITYRQ
LDYWARTSLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVEDLANITLFSDGTTVYEC
TSAEEVVDLLQGGQGVFGIAVSGAMRELTGVIADFPGERADGGESIAEPEDELASRRKHRDRKIG

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24249; Mature: 24249

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQPPTRARSREGTTVSEQPRQEQLNLAEDGNAGTGERSVTAAAAPVQPGLFPDDSVPD
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCH
ELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRL
HHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LDTGISLHNIRVAVDHLRQRGVEDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIA
HHCCCCHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCEEEHH
VSGAMRELTGVIADFPGERADGGESIAEPEDELASRRKHRDRKIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METQPPTRARSREGTTVSEQPRQEQLNLAEDGNAGTGERSVTAAAAPVQPGLFPDDSVPD
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCH
ELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRSAAGSGSQRLYSFKDILVLKIVKRL
HHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LDTGISLHNIRVAVDHLRQRGVEDLANITLFSDGTTVYECTSAEEVVDLLQGGQGVFGIA
HHCCCCHHHHHHHHHHHHHCCHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCCCEEEHH
VSGAMRELTGVIADFPGERADGGESIAEPEDELASRRKHRDRKIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]