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The map label for this gene is sufD [C]

Identifier: 41407286

GI number: 41407286

Start: 1248613

End: 1249803

Strand: Direct

Name: sufD [C]

Synonym: MAP1188

Alternate gene names: 41407286

Gene position: 1248613-1249803 (Clockwise)

Preceding gene: 41407285

Following gene: 41407287

Centisome position: 25.85

GC content: 69.69

Gene sequence:

>1191_bases
GTGACGAATCTGACTGAAGCGGTTGAGGGTTCGTCCCTGGCCGCCGCGAACAAGGGGGAGCTGTTCGCCTCCTTCGACGT
GGACGCCTTCGAGGTGCCGCACGGCCGCGACGAGATCTGGCGGTTCACCCCGCTGCGCCGGCTGCGCGGCCTGCACGACG
GCTCGGCGCCCGCCACCGGCAAGGCCGAGGTCAGCGTCGGCGAGCAACCCGGCCTGCGGGTACAGACCGTGCGCCGCGGC
GACGAGCGGCTGGGCCAGGGCGGCATCCCGACGGACCGTGTTGCCGCGCAGGCGTTTTCGTCGTTCAACTCCGCGACCCT
GATCACCGTGCCGCGTGACACCCAAATCGCCGAGCCGATCGGCGTCACCGTCACCGGGCCCGGGGAGGGGGCGGTGGCCT
ATGGGCACCTGCAGATCCGCGTCGAAGAGCTCGCCGAGGCGGTGGTGGTGATCGACCACCGCGGCAGCGGAACCCTCGCC
GACAACGTCGAATTCGTCGTCGACGACGCCGCCCGGCTCACCGTGGTGTGGCTGGCCGACTGGGCCGACGACGCCGTGCA
CGTCAGCATGCACCACGCCCGGCTGGGCAAGGACGCGGTGCTGCGCCACGTCGCGGTCACCCTCGGCGGTGAGCTGGTGC
GGTTGACCGCCAATGTGCGCTACACGAGCACCGGCGGCGACGCCGAGCTGTTGGGCCTGTACTTCGCCGACGACGGCCAG
CACCTGGAGTCGCGGCTGCTGGTCGACCACGCGCAGCCGGACTGCAAATCCAACGTGCTGTACAAGGGTGCGCTGCAAGG
CGATCCGGCCTCCGCGCTGCCCGACGCGCACACCGTGTGGGTGGGCGACGTGTTGATCCGCGCCGAAGCCACCGGCACCG
ACACCTTCGAGGTGAACCGCAACCTGGTGCTCACCGACGGCGCCCGCGCCGACTCGGTGCCCAACCTGGAGATCGAGACC
GGCGAGATCGCCGGGGCCGGACATGCCAGTGCCACCGGCCGTTTCGACGACGAGCAGCTGTTCTACCTGCGTTCCCGCGG
CATCCCCGAAGAGCAGGCGCGGCGCCTGGTGATCCGCGGCTTCTTCGCCGAAATCATCTCCAAGATCGCGGTGCCCGAGA
TCCGGGAACGCCTCACCGCAGCCATCGAACACGAACTGGCCTTCACCGAATCGAGAGCAACAGCTTCATGA

Upstream 100 bases:

>100_bases
TGCGCGGCTTCGTCGAGCCGATCGCCAAGGAGCTGCCCATGGAGTACGCGCTGGAGCTCAACCGGCTGATCGAGCTGCAG
ATGGAAGGCGCGGTCGGGTA

Downstream 100 bases:

>100_bases
CCACTCTGGAAATCAAAGACCTGCACGTCAGCGTCGTGAACCCGAACGCCGCCGAGTCCGAGCGCGAGATTCCCATCCTC
AACGGGGTCGACCTGACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTNLTEAVEGSSLAAANKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSAPATGKAEVSVGEQPGLRVQTVRRG
DERLGQGGIPTDRVAAQAFSSFNSATLITVPRDTQIAEPIGVTVTGPGEGAVAYGHLQIRVEELAEAVVVIDHRGSGTLA
DNVEFVVDDAARLTVVWLADWADDAVHVSMHHARLGKDAVLRHVAVTLGGELVRLTANVRYTSTGGDAELLGLYFADDGQ
HLESRLLVDHAQPDCKSNVLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEIET
GEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERLTAAIEHELAFTESRATAS

Sequences:

>Translated_396_residues
MTNLTEAVEGSSLAAANKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSAPATGKAEVSVGEQPGLRVQTVRRG
DERLGQGGIPTDRVAAQAFSSFNSATLITVPRDTQIAEPIGVTVTGPGEGAVAYGHLQIRVEELAEAVVVIDHRGSGTLA
DNVEFVVDDAARLTVVWLADWADDAVHVSMHHARLGKDAVLRHVAVTLGGELVRLTANVRYTSTGGDAELLGLYFADDGQ
HLESRLLVDHAQPDCKSNVLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEIET
GEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERLTAAIEHELAFTESRATAS
>Mature_395_residues
TNLTEAVEGSSLAAANKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSAPATGKAEVSVGEQPGLRVQTVRRGD
ERLGQGGIPTDRVAAQAFSSFNSATLITVPRDTQIAEPIGVTVTGPGEGAVAYGHLQIRVEELAEAVVVIDHRGSGTLAD
NVEFVVDDAARLTVVWLADWADDAVHVSMHHARLGKDAVLRHVAVTLGGELVRLTANVRYTSTGGDAELLGLYFADDGQH
LESRLLVDHAQPDCKSNVLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNRNLVLTDGARADSVPNLEIETG
EIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERLTAAIEHELAFTESRATAS

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=314, Percent_Identity=27.3885350318471, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 42505; Mature: 42374

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLTEAVEGSSLAAANKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSAPATG
CCCHHHHHCCCCEEECCCCCEEEEECCCEEECCCCHHHHHEECHHHHHCCCCCCCCCCCC
KAEVSVGEQPGLRVQTVRRGDERLGQGGIPTDRVAAQAFSSFNSATLITVPRDTQIAEPI
CEEEEECCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
GVTVTGPGEGAVAYGHLQIRVEELAEAVVVIDHRGSGTLADNVEFVVDDAARLTVVWLAD
EEEEECCCCCCEEEEEEEEEHHHHCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEC
WADDAVHVSMHHARLGKDAVLRHVAVTLGGELVRLTANVRYTSTGGDAELLGLYFADDGQ
CCCCEEEEEEHHHHCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCH
HLESRLLVDHAQPDCKSNVLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNR
HHHHHHEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECC
NLVLTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRG
CEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
FFAEIISKIAVPEIRERLTAAIEHELAFTESRATAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure 
TNLTEAVEGSSLAAANKGELFASFDVDAFEVPHGRDEIWRFTPLRRLRGLHDGSAPATG
CCHHHHHCCCCEEECCCCCEEEEECCCEEECCCCHHHHHEECHHHHHCCCCCCCCCCCC
KAEVSVGEQPGLRVQTVRRGDERLGQGGIPTDRVAAQAFSSFNSATLITVPRDTQIAEPI
CEEEEECCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
GVTVTGPGEGAVAYGHLQIRVEELAEAVVVIDHRGSGTLADNVEFVVDDAARLTVVWLAD
EEEEECCCCCCEEEEEEEEEHHHHCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEEEC
WADDAVHVSMHHARLGKDAVLRHVAVTLGGELVRLTANVRYTSTGGDAELLGLYFADDGQ
CCCCEEEEEEHHHHCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCH
HLESRLLVDHAQPDCKSNVLYKGALQGDPASALPDAHTVWVGDVLIRAEATGTDTFEVNR
HHHHHHEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECC
NLVLTDGARADSVPNLEIETGEIAGAGHASATGRFDDEQLFYLRSRGIPEEQARRLVIRG
CEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
FFAEIISKIAVPEIRERLTAAIEHELAFTESRATAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]