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The map label for this gene is sufB [H]

Identifier: 41407285

GI number: 41407285

Start: 1247165

End: 1248613

Strand: Direct

Name: sufB [H]

Synonym: MAP1187

Alternate gene names: 41407285

Gene position: 1247165-1248613 (Clockwise)

Preceding gene: 41407284

Following gene: 41407286

Centisome position: 25.82

GC content: 66.32

Gene sequence:

>1449_bases
ATGACCCTCACGCCCGAGGCCAGCAAGACGGCCGTCGCGCCGCTGACCCAGGAAGAGGCGATCGCTTCGCTGGGGCGGTA
CGGCTACGGCTGGGCGGACTCCGACGTCGCCGGCGCCAGCGCCCAGCGCGGCCTGTCCGAGGCCGTCGTCCGCGACATCT
CGGCGAAGAAGAACGAGCCCGAGTGGATGCTGCAGACCCGGCTGAAGGCGCTGCGCATCTTCGAGCGCAAGCCGATGCCG
ACCTGGGGCTCGAACCTGGACGGCATCGACTTCGACAACATCAAGTACTTCGTGCGCTCCACCGAGAAGCAGGCCGCCAG
CTGGGAGGACCTGCCCGAGGACATCCGCAACACCTATGACCGGCTGGGCATCCCGGAGGCCGAGAAGCAGCGGCTGGTCG
CCGGGGTGGCGGCCCAGTACGAGTCCGAGGTGGTCTACCACCAGATCCGCGAGGACCTGGAAGCCCAGGGCGTCATCTTC
ATGGACACCGACACCGGTCTGCGCGAACACCCCGAGATCTTCCAGGAGTACTTCGGCACCGTGATCCCGGCCGGGGACAA
CAAGTTCTCCGCGCTGAACACCGCGGTGTGGAGCGGCGGTTCGTTCATCTACGTGCCGCCGGGCGTGCACGTGGACATCC
CGCTGCAGGCCTACTTCCGGATCAACACCGAGAACATGGGCCAGTTCGAGCGGACGCTGATCATCGCCGACGAGGGCTCC
TACGTGCACTACGTGGAGGGCTGCACGGCGCCGATCTACAAGTCCGACTCGCTGCACTCGGCGGTCGTCGAGATCATCGT
GAAACCCAATGCGCGCGTTCGGTATACGACCATCCAGAACTGGTCGGGCAACGTCTACAACCTGGTCACCAAGCGGGCCC
GGGCCGAGGCCGGCGCCACCATGGAGTGGATCGACGGCAACATCGGGTCGAAGGTCACCATGAAGTACCCGGCGGTGTGG
ATGACCGGCGAGCACGCCAAGGGCGAGGTGCTCTCGGTGGCCTTCGCCGGCGAGGACCAGCACCAGGACACCGGCGCGAA
AATGCTGCACCTGGCCCCGAACACGTCGAGCAACATCGTGTCCAAGTCGGTGGCCCGCGGCGGCGGCCGCACCTCCTACC
GCGGCCTGGTCCAGGTGAACAAGGGCGCGCACGGATCGTGTTCCAGCGTGAAATGCGATGCGCTGCTGGTGGATACGATC
AGCCGCAGCGACACCTACCCGTACGTCGACATCCGCGAGGACGACGTCACTATGGGGCACGAGGCCACCGTGTCCAAGGT
CAGCGAGAACCAGCTGTTCTACCTGATGAGCCGGGGGCTGACCGAGGACGAGGCGATGGCGATGGTGGTGCGCGGCTTCG
TCGAGCCGATCGCCAAGGAGCTGCCCATGGAGTACGCGCTGGAGCTCAACCGGCTGATCGAGCTGCAGATGGAAGGCGCG
GTCGGGTAG

Upstream 100 bases:

>100_bases
TCAACGGCGACTGCGCGTGCACCACGCACGTGCCGCTGGCTCAGACAGCCAAGGCGCCCAGCCCGCGCCGCCACACCACG
AGCAACAAAGGAGCGTCCCT

Downstream 100 bases:

>100_bases
TGACGAATCTGACTGAAGCGGTTGAGGGTTCGTCCCTGGCCGCCGCGAACAAGGGGGAGCTGTTCGCCTCCTTCGACGTG
GACGCCTTCGAGGTGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MTLTPEASKTAVAPLTQEEAIASLGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEPEWMLQTRLKALRIFERKPMP
TWGSNLDGIDFDNIKYFVRSTEKQAASWEDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIF
MDTDTGLREHPEIFQEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGS
YVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSGNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVW
MTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSCSSVKCDALLVDTI
SRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGA
VG

Sequences:

>Translated_482_residues
MTLTPEASKTAVAPLTQEEAIASLGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEPEWMLQTRLKALRIFERKPMP
TWGSNLDGIDFDNIKYFVRSTEKQAASWEDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIF
MDTDTGLREHPEIFQEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGS
YVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSGNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVW
MTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSCSSVKCDALLVDTI
SRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGA
VG
>Mature_481_residues
TLTPEASKTAVAPLTQEEAIASLGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEPEWMLQTRLKALRIFERKPMPT
WGSNLDGIDFDNIKYFVRSTEKQAASWEDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFM
DTDTGLREHPEIFQEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGSY
VHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSGNVYNLVTKRARAEAGATMEWIDGNIGSKVTMKYPAVWM
TGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSCSSVKCDALLVDTIS
RSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAV
G

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=462, Percent_Identity=40.2597402597403, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=26.6233766233766, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53305; Mature: 53173

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPEASKTAVAPLTQEEAIASLGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEP
CCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCC
EWMLQTRLKALRIFERKPMPTWGSNLDGIDFDNIKYFVRSTEKQAASWEDLPEDIRNTYD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHH
RLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFMDTDTGLREHPEIFQEYFGT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCE
VIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGS
EECCCCCCCHHHHHHEECCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEECCCC
YVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSGNVYNLVTKRARAEAGAT
EEEEECCCCCCCCCCCCHHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCE
MEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIV
EEEECCCCCCEEEEECCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHH
SKSVARGGGRTSYRGLVQVNKGAHGSCSSVKCDALLVDTISRSDTYPYVDIREDDVTMGH
HHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECEEEEEHHCCCCCCCEEEECCCCCCCCC
EATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGA
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCC
VG
CC
>Mature Secondary Structure 
TLTPEASKTAVAPLTQEEAIASLGRYGYGWADSDVAGASAQRGLSEAVVRDISAKKNEP
CCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCC
EWMLQTRLKALRIFERKPMPTWGSNLDGIDFDNIKYFVRSTEKQAASWEDLPEDIRNTYD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHH
RLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQGVIFMDTDTGLREHPEIFQEYFGT
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCE
VIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADEGS
EECCCCCCCHHHHHHEECCCCEEEECCCCEEEECEEEEEEECCCCCCCEEEEEEEECCCC
YVHYVEGCTAPIYKSDSLHSAVVEIIVKPNARVRYTTIQNWSGNVYNLVTKRARAEAGAT
EEEEECCCCCCCCCCCCHHHHHHEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCE
MEWIDGNIGSKVTMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIV
EEEECCCCCCEEEEECCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHH
SKSVARGGGRTSYRGLVQVNKGAHGSCSSVKCDALLVDTISRSDTYPYVDIREDDVTMGH
HHHHHCCCCCCCCCEEEEECCCCCCCCCCEEECEEEEEHHCCCCCCCEEEECCCCCCCCC
EATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGA
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCC
VG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]