| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407284
Identifier: 41407284
GI number: 41407284
Start: 1246323
End: 1247168
Strand: Direct
Name: 41407284
Synonym: MAP1186
Alternate gene names: NA
Gene position: 1246323-1247168 (Clockwise)
Preceding gene: 41407279
Following gene: 41407285
Centisome position: 25.8
GC content: 71.04
Gene sequence:
>846_bases GTGCAGCCTATCCGGTGTGACCAGGGCAACCGTCCACCCAGGGCACCCTTGCTAGACCGATCCCCGGAATTGCGTCACAC TGGTGTTGTGAAAATCCGAACCAGCCTCGATGACGCTGCCGTGGGCGCGGCGGGCGCGGCTGTGCCGGATGGTCACACCC GCCGCGCCATCGTGCGCCTGCTGCTGGAATCCGGGTCGATCACCGCCGGCGAGATCGGTGACCGGCTGGGTCTGGCGGCC GCTGGGGTGCGGCGTCACCTCGACGCGCTGATCGAGGCGGGCGACGCCGAGTCCATCGCACCCGCGGCGTGGCAGCACGC GGGTCGCGGCCGTCCGGCCAAGCGCTACCGGTTGACGTCGGCCGGCCGCGCCAAGCTCGACCACGCCTACGACGATCTGG CCGCCGCGGCCATGCGCCAGCTGCGTGAAATCGGCGGTGAGGAGGCGGTTCAGGCATTCGCCCGGCAGCGCATCGACGCC ATTCTGGCCGGTGTCCCCGGCGCCGCCAGCGCGGCCGACGACGACATCGAGGCGGCCGCCGAGCGGATCGCCACCGCGCT GACCAAGGCGGGGTATGTCGCCACCACCACGCAGGTCGGCGGGCCGATCCACGGCGTGCAGATCTGCCAGCATCACTGCC CGGTGTCGCACGTCGCCGAGGAGTTCCCGGAGCTGTGCGACGCCGAACAGCAGGCGATGGCCGAGGTGCTGGGCACCCAT GTCCAGCGGTTGGCGACCATCGTCAACGGCGACTGCGCGTGCACCACGCACGTGCCGCTGGCTCAGACAGCCAAGGCGCC CAGCCCGCGCCGCCACACCACGAGCAACAAAGGAGCGTCCCTATGA
Upstream 100 bases:
>100_bases GCGGTGAGCTCGGTATCGTTCAGCGGCGAGCCCACTGCCTGCTCGTCGCCGTGCAGACTCGCGATCGACGAGCTCAGCGT GTGGTGGCGGGCTGCCATCA
Downstream 100 bases:
>100_bases CCCTCACGCCCGAGGCCAGCAAGACGGCCGTCGCGCCGCTGACCCAGGAAGAGGCGATCGCTTCGCTGGGGCGGTACGGC TACGGCTGGGCGGACTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Regulatory Protein ArsR; Transcriptional Regulatory Protein; ArsR Transcriptional Regulator; SufR Family Transcriptional Regulator; Arsr Family Transcriptional Regulator; ArsR Family Regulator; Transcriptional Regulator ArsR Family; DeoR Family Transcriptional Regulator
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MQPIRCDQGNRPPRAPLLDRSPELRHTGVVKIRTSLDDAAVGAAGAAVPDGHTRRAIVRLLLESGSITAGEIGDRLGLAA AGVRRHLDALIEAGDAESIAPAAWQHAGRGRPAKRYRLTSAGRAKLDHAYDDLAAAAMRQLREIGGEEAVQAFARQRIDA ILAGVPGAASAADDDIEAAAERIATALTKAGYVATTTQVGGPIHGVQICQHHCPVSHVAEEFPELCDAEQQAMAEVLGTH VQRLATIVNGDCACTTHVPLAQTAKAPSPRRHTTSNKGASL
Sequences:
>Translated_281_residues MQPIRCDQGNRPPRAPLLDRSPELRHTGVVKIRTSLDDAAVGAAGAAVPDGHTRRAIVRLLLESGSITAGEIGDRLGLAA AGVRRHLDALIEAGDAESIAPAAWQHAGRGRPAKRYRLTSAGRAKLDHAYDDLAAAAMRQLREIGGEEAVQAFARQRIDA ILAGVPGAASAADDDIEAAAERIATALTKAGYVATTTQVGGPIHGVQICQHHCPVSHVAEEFPELCDAEQQAMAEVLGTH VQRLATIVNGDCACTTHVPLAQTAKAPSPRRHTTSNKGASL >Mature_281_residues MQPIRCDQGNRPPRAPLLDRSPELRHTGVVKIRTSLDDAAVGAAGAAVPDGHTRRAIVRLLLESGSITAGEIGDRLGLAA AGVRRHLDALIEAGDAESIAPAAWQHAGRGRPAKRYRLTSAGRAKLDHAYDDLAAAAMRQLREIGGEEAVQAFARQRIDA ILAGVPGAASAADDDIEAAAERIATALTKAGYVATTTQVGGPIHGVQICQHHCPVSHVAEEFPELCDAEQQAMAEVLGTH VQRLATIVNGDCACTTHVPLAQTAKAPSPRRHTTSNKGASL
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29421; Mature: 29421
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPIRCDQGNRPPRAPLLDRSPELRHTGVVKIRTSLDDAAVGAAGAAVPDGHTRRAIVRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHH LLESGSITAGEIGDRLGLAAAGVRRHLDALIEAGDAESIAPAAWQHAGRGRPAKRYRLTS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHEECCC AGRAKLDHAYDDLAAAAMRQLREIGGEEAVQAFARQRIDAILAGVPGAASAADDDIEAAA CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ERIATALTKAGYVATTTQVGGPIHGVQICQHHCPVSHVAEEFPELCDAEQQAMAEVLGTH HHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHH VQRLATIVNGDCACTTHVPLAQTAKAPSPRRHTTSNKGASL HHHHHHHHCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQPIRCDQGNRPPRAPLLDRSPELRHTGVVKIRTSLDDAAVGAAGAAVPDGHTRRAIVRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHHHHHH LLESGSITAGEIGDRLGLAAAGVRRHLDALIEAGDAESIAPAAWQHAGRGRPAKRYRLTS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHEECCC AGRAKLDHAYDDLAAAAMRQLREIGGEEAVQAFARQRIDAILAGVPGAASAADDDIEAAA CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH ERIATALTKAGYVATTTQVGGPIHGVQICQHHCPVSHVAEEFPELCDAEQQAMAEVLGTH HHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHH VQRLATIVNGDCACTTHVPLAQTAKAPSPRRHTTSNKGASL HHHHHHHHCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA