| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407279
Identifier: 41407279
GI number: 41407279
Start: 1241195
End: 1241854
Strand: Direct
Name: 41407279
Synonym: MAP1181
Alternate gene names: NA
Gene position: 1241195-1241854 (Clockwise)
Preceding gene: 41407277
Following gene: 41407284
Centisome position: 25.7
GC content: 74.55
Gene sequence:
>660_bases ATGTGCTTATCATGCCCGGGCATGAAACTCGCCCGTCCGGACGTCTTCCATCCCCGCATCGTGCTGGCGGGTCGCCGCGA CGATCCCGGGCTGGTGTCCGCGCTGCGCCGGCGTGGCCTGCATGCACGCCGGCTGCCCTGGGAGGACCCCGAGACGCTGC AGGCCGACCTGGTGATCGTGCGGGTCGGCCCGGATGCCGCGCGGCGCGACGAGTTCCTGGCCTGGACCCGCCGCCCCCGG CACCTGCTCAACCCGCCCGCGGCGCTGGCGTGGAACCTCGACGCGCATTATCTGCGCGACCTGCGCGACGGCGGCGTGCC GACGCGGCCGGGCGCTCAGCCCGACACATCGTTGATCTTCCTGGGCGGCGCGCAGTCGCACGCCTGGCCGGCCGAGCCGG AATTCGAGTCCTGGGACCTCGGCCACGCCGCGCTCGCCGTGGCCGCCGACCATACCGGGATCGGCGTGCCGGAGTTGCTG TTCGCGCGCGCCGACCTGGCCGGGGACCGGCTGGTGCGGCTGGACCTGGTCGCGCCGGAACTGGGCTGGCGACACCTCGA CACCCCGGGCCGCGAGGCCGCGCAGCGCCGGTTCGCGCTGGCGGTCGAGTCAGCCTGTGAGCGGCTCGGCCTGGGCCCGC TGTCGCATCGACGCCCATAG
Upstream 100 bases:
>100_bases GGCCTTGATCAGCACCTGCCCCGGCCCGGCGGTGGGTGTGGGGGTTTCGACGTAGCGCAGCACCTCGGGGCCGCCGGTTT CGCTGACTTCGATTGCGTGC
Downstream 100 bases:
>100_bases CGCGGCGGTGGCCGCGGTGCACGCGGCCGCCCCCGCCACGTGCACGGCCACCAGCGCGGCGGGCACCCCCGTGTAGTACT GCGCGGTGCCGACGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MCLSCPGMKLARPDVFHPRIVLAGRRDDPGLVSALRRRGLHARRLPWEDPETLQADLVIVRVGPDAARRDEFLAWTRRPR HLLNPPAALAWNLDAHYLRDLRDGGVPTRPGAQPDTSLIFLGGAQSHAWPAEPEFESWDLGHAALAVAADHTGIGVPELL FARADLAGDRLVRLDLVAPELGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP
Sequences:
>Translated_219_residues MCLSCPGMKLARPDVFHPRIVLAGRRDDPGLVSALRRRGLHARRLPWEDPETLQADLVIVRVGPDAARRDEFLAWTRRPR HLLNPPAALAWNLDAHYLRDLRDGGVPTRPGAQPDTSLIFLGGAQSHAWPAEPEFESWDLGHAALAVAADHTGIGVPELL FARADLAGDRLVRLDLVAPELGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP >Mature_219_residues MCLSCPGMKLARPDVFHPRIVLAGRRDDPGLVSALRRRGLHARRLPWEDPETLQADLVIVRVGPDAARRDEFLAWTRRPR HLLNPPAALAWNLDAHYLRDLRDGGVPTRPGAQPDTSLIFLGGAQSHAWPAEPEFESWDLGHAALAVAADHTGIGVPELL FARADLAGDRLVRLDLVAPELGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24188; Mature: 24188
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLSCPGMKLARPDVFHPRIVLAGRRDDPGLVSALRRRGLHARRLPWEDPETLQADLVIV CCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE RVGPDAARRDEFLAWTRRPRHLLNPPAALAWNLDAHYLRDLRDGGVPTRPGAQPDTSLIF EECCCHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEE LGGAQSHAWPAEPEFESWDLGHAALAVAADHTGIGVPELLFARADLAGDRLVRLDLVAPE EECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCC LGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MCLSCPGMKLARPDVFHPRIVLAGRRDDPGLVSALRRRGLHARRLPWEDPETLQADLVIV CCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE RVGPDAARRDEFLAWTRRPRHLLNPPAALAWNLDAHYLRDLRDGGVPTRPGAQPDTSLIF EECCCHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEE LGGAQSHAWPAEPEFESWDLGHAALAVAADHTGIGVPELLFARADLAGDRLVRLDLVAPE EECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCC LGWRHLDTPGREAAQRRFALAVESACERLGLGPLSHRRP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA