| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ppc
Identifier: 41407267
GI number: 41407267
Start: 1226255
End: 1229062
Strand: Direct
Name: ppc
Synonym: MAP1169
Alternate gene names: 41407267
Gene position: 1226255-1229062 (Clockwise)
Preceding gene: 41407265
Following gene: 41407268
Centisome position: 25.39
GC content: 71.15
Gene sequence:
>2808_bases ATGGTTGAGGCATCCGAGGGCACGCTGGAACCGATCGGCGCCGTCCAGCGCACCCTGGTGGGGCGCGAGGCCACCGAGCC GATGCGGGCCGACATTCGGCTGCTCGGCGCCATCCTGGGCGACACGGTGCGCGAGCAGAACGGCCAGCAGGTGTTCGAGC TCGTCGAACGCGCCCGGGTGGAATCGTTCCGGGTGCGGCGCTCCGAGATCGACCGGGCCGAGCTGGCCCGGATGTTCGCG GGCATCGACATCCACCAGGCCATCCCGGTCATCCGCGCCTTCAGCCACTTCGCGCTGCTGGCCAACGTCGCCGAGGACAT CCACCGGGAGCGCCGCCGGGCGATCCACGTCGCCGCCGGCGAACCGCCGCAGGACAGCAGCCTGGCCGCCACCTACGCCA AACTCGATCGCGCACAACTGGATTCGGCCATGGTGGCCGAGGCGCTGCGGGGCGCGGTGGTGTCCCCGGTGATCACCGCC CACCCCACTGAGACCCGGCGGCGCACCGTCTTCGTCACCCAGCACCGGATCACCGAGCTGATGCGGCTGCACGCCGAAGG GCACACCGAAACCGACGACGGCCGCAACATCGAGCTGGAGCTGCGCCGCCAGGTCCTCACGCTGTGGCAGACCGCGCTGA TCCGGCTGTCCCGCCTGCAGATCACCGACGAGATCGAGGTGGGGCTGCGCTACTACGCCGCCGCCTTCTTCAAGGTCATC CCGCAGGTCAACGCCGAGGTCCGCAACGCGCTGCGGGCCCGCTGGCCCGGCGCCGACCTGCTCGACGAGCCGATCGTGGC ACCCGGCTCCTGGATCGGCGGCGACCGCGACGGCAACCCCAACGTGACGGCCGACGTGGTGCGCCGGGCCACCGGCGACG CCGCCTACACCGCGCTGGCGCACTACCTGGCCGAGCTGACCGCCTGCGAGCAGGAGCTGTCGATGTCGGCGCGCCTGGTC GCGGTCACCCCCGAGCTGGCCGCGCTGGCCGAGGACTGCGCCGAGAAGGCCCGCGCCGACGAGCCGTACCGGCGGGCGCT GCGGGTGATCCGCGGCCGGCTCACCGCCACCGCCGCCGAGATCCTGGACCGCCGACCGCAACACGAGCTGGACCTGGGTT TGCCGCCGTACGCCACGCCGGCCGAACTGCGGGCCGACCTCGACACCGTCGACGCGTCGTTGCGCGCGCACGGCAGCGCG CTGCTGGCCGACGACCGCCTGGCCCTGCTGCGAGAAGGCGTGCGGGTCTTCGGGTTTCACCTGTGTGGCCTGGACATGCG GCAGAACTCCGACGTGCACGAGGAAGTGGTGGCCGAGCTGCTGGCCTGGGCGGGCGTGCACCCGGACTACCGGTCGCTGC CCGAGGACGAGCGGGTGGAGCTGCTGGCGGCCGAGCTGGGCACCCGCCGGCCGCTGGTCGGGGACCGCGCGGAACTGTCC GAGCTGGCCGACAAGGAGCTGGGTGTGGTGCGCGCGGCGGCGCACGCCATCCGGCGGTACGGCCCGGCCGCCGTGCCCAA CTACGTCATCTCGATGTGCCGCTCGGTCTCCGATGTGCTCGAGGCCGCGATCCTGCTCAAAGAGGCGGGGCTGATCGACG CGTCGGGCCCCGAACCCTATTGCCCGGTGGGCATCTCACCGCTGCTCGAGACCATCGAGGACCTGCACAACGGCGCGGCG ATCCTGCACGCGATGCTCGAGCTCCCGCTGTACCGGGCGTTGGTGGCCGCCCGCGGACAGAGCCAGGAGGTGATGCTGGG CTACTCCGACTCCAACAAGGACGGCGGGTACCTGGCGTCGAGCTGGGCGGTGTACCGCGCCGAGCTGGCGCTGGTCGAGG TGGCCCGCAAAATCGGAATCCGGTTGCGGCTCTTCCACGGTCGCGGCGGCACCGTCGGGCGCGGCGGCGGACCGAGCTAC GAAGCGATCCTGGCGCAGCCCCCCGGCGCGGTGAACGGCTCGCTGCGGCTCACCGAGCAGGGCGAGGTGATCGCCGCCAA ATACGCCGAACCCCAAGTGGCGCAACGCAATCTGGAAAGCCTGGTGGCCGCCACGCTGGAGTCGACGCTGCTCGACGTCG AGGGCCTGGGCGACACCGCCGAACCCGCGTATGCCGTGCTCGACGAGGTGGCAGTGCTGGCGCAGCGCGCCTACGCCGAA TTGGTGCACGAGACACCGGGTTTCGTGGACTACTTCATGGCCTCCACCCCGGTCAGCGAGATCGGCTCGCTGAACATCGG CAGCCGGCCCACCTCACGCAAGCCCACCGAGTCCATCGCGGATTTGCGCGCCATTCCCTGGGTGCTGGCCTGGAGTCAGT CCCGGGTGATGCTGCCCGGTTGGTACGGCACCGGTTCGGCGTTCGAGCAGTGGATCGCGGCCGGCCCGCAGAGCCGGGCC GAGCGGGTCGACATCCTGCACGACCTGTACCGTCGCTGGCCGTTCTTCCGCAGCGTGCTGTCGAACCTGGCCCAGGTGCT GGCCAAAAGTGACCTGGGCCTGGCCGCGCAGTACGCCGAGCTGGTCGACGACGCGGCACTGCGGCGGCGGGTGTTCGGCA AGATCGCCGACGAGCACCGCCGCACCATCGCCATGCACAAGCTGATCACCGGCCAGGACAACCTGCTCGCCGACAACCCC GCGCTGGCGCGTTCGGTGTTCAACCGCTTCCCCTACCTCGAGCCGCTCAACCACCTGCAGGTGGAGCTGCTGCGCCGCTA CCGCAGCGGCGACGACGACGAACTGGTGCAGCGCGGCATCCTGCTGACGATGAACGGACTGGCCAGCGCGCTGCGAAACA GCGGCTGA
Upstream 100 bases:
>100_bases GTCAACCAACGCGGGCGCCCGCGCGACAATTCCGGGCGGCCCCGGGCGCCGCGATTGCGCCGACGGGCGGCCGCCGGCGC CGGCACCGATACTGGGTTCC
Downstream 100 bases:
>100_bases CGACACGCGAATTGCTCACCCCGGCGGCCCGGTCGCGCATACGCTGAGCCGACGCGACCTCGACCAAGGAGACCCGTGAG CGGACCCGGCCTTCCCCTGT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 935; Mature: 935
Protein sequence:
>935_residues MVEASEGTLEPIGAVQRTLVGREATEPMRADIRLLGAILGDTVREQNGQQVFELVERARVESFRVRRSEIDRAELARMFA GIDIHQAIPVIRAFSHFALLANVAEDIHRERRRAIHVAAGEPPQDSSLAATYAKLDRAQLDSAMVAEALRGAVVSPVITA HPTETRRRTVFVTQHRITELMRLHAEGHTETDDGRNIELELRRQVLTLWQTALIRLSRLQITDEIEVGLRYYAAAFFKVI PQVNAEVRNALRARWPGADLLDEPIVAPGSWIGGDRDGNPNVTADVVRRATGDAAYTALAHYLAELTACEQELSMSARLV AVTPELAALAEDCAEKARADEPYRRALRVIRGRLTATAAEILDRRPQHELDLGLPPYATPAELRADLDTVDASLRAHGSA LLADDRLALLREGVRVFGFHLCGLDMRQNSDVHEEVVAELLAWAGVHPDYRSLPEDERVELLAAELGTRRPLVGDRAELS ELADKELGVVRAAAHAIRRYGPAAVPNYVISMCRSVSDVLEAAILLKEAGLIDASGPEPYCPVGISPLLETIEDLHNGAA ILHAMLELPLYRALVAARGQSQEVMLGYSDSNKDGGYLASSWAVYRAELALVEVARKIGIRLRLFHGRGGTVGRGGGPSY EAILAQPPGAVNGSLRLTEQGEVIAAKYAEPQVAQRNLESLVAATLESTLLDVEGLGDTAEPAYAVLDEVAVLAQRAYAE LVHETPGFVDYFMASTPVSEIGSLNIGSRPTSRKPTESIADLRAIPWVLAWSQSRVMLPGWYGTGSAFEQWIAAGPQSRA ERVDILHDLYRRWPFFRSVLSNLAQVLAKSDLGLAAQYAELVDDAALRRRVFGKIADEHRRTIAMHKLITGQDNLLADNP ALARSVFNRFPYLEPLNHLQVELLRRYRSGDDDELVQRGILLTMNGLASALRNSG
Sequences:
>Translated_935_residues MVEASEGTLEPIGAVQRTLVGREATEPMRADIRLLGAILGDTVREQNGQQVFELVERARVESFRVRRSEIDRAELARMFA GIDIHQAIPVIRAFSHFALLANVAEDIHRERRRAIHVAAGEPPQDSSLAATYAKLDRAQLDSAMVAEALRGAVVSPVITA HPTETRRRTVFVTQHRITELMRLHAEGHTETDDGRNIELELRRQVLTLWQTALIRLSRLQITDEIEVGLRYYAAAFFKVI PQVNAEVRNALRARWPGADLLDEPIVAPGSWIGGDRDGNPNVTADVVRRATGDAAYTALAHYLAELTACEQELSMSARLV AVTPELAALAEDCAEKARADEPYRRALRVIRGRLTATAAEILDRRPQHELDLGLPPYATPAELRADLDTVDASLRAHGSA LLADDRLALLREGVRVFGFHLCGLDMRQNSDVHEEVVAELLAWAGVHPDYRSLPEDERVELLAAELGTRRPLVGDRAELS ELADKELGVVRAAAHAIRRYGPAAVPNYVISMCRSVSDVLEAAILLKEAGLIDASGPEPYCPVGISPLLETIEDLHNGAA ILHAMLELPLYRALVAARGQSQEVMLGYSDSNKDGGYLASSWAVYRAELALVEVARKIGIRLRLFHGRGGTVGRGGGPSY EAILAQPPGAVNGSLRLTEQGEVIAAKYAEPQVAQRNLESLVAATLESTLLDVEGLGDTAEPAYAVLDEVAVLAQRAYAE LVHETPGFVDYFMASTPVSEIGSLNIGSRPTSRKPTESIADLRAIPWVLAWSQSRVMLPGWYGTGSAFEQWIAAGPQSRA ERVDILHDLYRRWPFFRSVLSNLAQVLAKSDLGLAAQYAELVDDAALRRRVFGKIADEHRRTIAMHKLITGQDNLLADNP ALARSVFNRFPYLEPLNHLQVELLRRYRSGDDDELVQRGILLTMNGLASALRNSG >Mature_935_residues MVEASEGTLEPIGAVQRTLVGREATEPMRADIRLLGAILGDTVREQNGQQVFELVERARVESFRVRRSEIDRAELARMFA GIDIHQAIPVIRAFSHFALLANVAEDIHRERRRAIHVAAGEPPQDSSLAATYAKLDRAQLDSAMVAEALRGAVVSPVITA HPTETRRRTVFVTQHRITELMRLHAEGHTETDDGRNIELELRRQVLTLWQTALIRLSRLQITDEIEVGLRYYAAAFFKVI PQVNAEVRNALRARWPGADLLDEPIVAPGSWIGGDRDGNPNVTADVVRRATGDAAYTALAHYLAELTACEQELSMSARLV AVTPELAALAEDCAEKARADEPYRRALRVIRGRLTATAAEILDRRPQHELDLGLPPYATPAELRADLDTVDASLRAHGSA LLADDRLALLREGVRVFGFHLCGLDMRQNSDVHEEVVAELLAWAGVHPDYRSLPEDERVELLAAELGTRRPLVGDRAELS ELADKELGVVRAAAHAIRRYGPAAVPNYVISMCRSVSDVLEAAILLKEAGLIDASGPEPYCPVGISPLLETIEDLHNGAA ILHAMLELPLYRALVAARGQSQEVMLGYSDSNKDGGYLASSWAVYRAELALVEVARKIGIRLRLFHGRGGTVGRGGGPSY EAILAQPPGAVNGSLRLTEQGEVIAAKYAEPQVAQRNLESLVAATLESTLLDVEGLGDTAEPAYAVLDEVAVLAQRAYAE LVHETPGFVDYFMASTPVSEIGSLNIGSRPTSRKPTESIADLRAIPWVLAWSQSRVMLPGWYGTGSAFEQWIAAGPQSRA ERVDILHDLYRRWPFFRSVLSNLAQVLAKSDLGLAAQYAELVDDAALRRRVFGKIADEHRRTIAMHKLITGQDNLLADNP ALARSVFNRFPYLEPLNHLQVELLRRYRSGDDDELVQRGILLTMNGLASALRNSG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=926, Percent_Identity=35.7451403887689, Blast_Score=453, Evalue=1e-128,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 102600; Mature: 102600
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEASEGTLEPIGAVQRTLVGREATEPMRADIRLLGAILGDTVREQNGQQVFELVERARV CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ESFRVRRSEIDRAELARMFAGIDIHQAIPVIRAFSHFALLANVAEDIHRERRRAIHVAAG HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC EPPQDSSLAATYAKLDRAQLDSAMVAEALRGAVVSPVITAHPTETRRRTVFVTQHRITEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEHHHHHHHH MRLHAEGHTETDDGRNIELELRRQVLTLWQTALIRLSRLQITDEIEVGLRYYAAAFFKVI HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH PQVNAEVRNALRARWPGADLLDEPIVAPGSWIGGDRDGNPNVTADVVRRATGDAAYTALA HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH HYLAELTACEQELSMSARLVAVTPELAALAEDCAEKARADEPYRRALRVIRGRLTATAAE HHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ILDRRPQHELDLGLPPYATPAELRADLDTVDASLRAHGSALLADDRLALLREGVRVFGFH HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHHH LCGLDMRQNSDVHEEVVAELLAWAGVHPDYRSLPEDERVELLAAELGTRRPLVGDRAELS HCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHH ELADKELGVVRAAAHAIRRYGPAAVPNYVISMCRSVSDVLEAAILLKEAGLIDASGPEPY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC CPVGISPLLETIEDLHNGAAILHAMLELPLYRALVAARGQSQEVMLGYSDSNKDGGYLAS CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEHH SWAVYRAELALVEVARKIGIRLRLFHGRGGTVGRGGGPSYEAILAQPPGAVNGSLRLTEQ HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECC GEVIAAKYAEPQVAQRNLESLVAATLESTLLDVEGLGDTAEPAYAVLDEVAVLAQRAYAE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LVHETPGFVDYFMASTPVSEIGSLNIGSRPTSRKPTESIADLRAIPWVLAWSQSRVMLPG HHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEECCC WYGTGSAFEQWIAAGPQSRAERVDILHDLYRRWPFFRSVLSNLAQVLAKSDLGLAAQYAE CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHH LVDDAALRRRVFGKIADEHRRTIAMHKLITGQDNLLADNPALARSVFNRFPYLEPLNHLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VELLRRYRSGDDDELVQRGILLTMNGLASALRNSG HHHHHHHCCCCHHHHHHCCHHEEHHHHHHHHHCCC >Mature Secondary Structure MVEASEGTLEPIGAVQRTLVGREATEPMRADIRLLGAILGDTVREQNGQQVFELVERARV CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ESFRVRRSEIDRAELARMFAGIDIHQAIPVIRAFSHFALLANVAEDIHRERRRAIHVAAG HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC EPPQDSSLAATYAKLDRAQLDSAMVAEALRGAVVSPVITAHPTETRRRTVFVTQHRITEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEHHHHHHHH MRLHAEGHTETDDGRNIELELRRQVLTLWQTALIRLSRLQITDEIEVGLRYYAAAFFKVI HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH PQVNAEVRNALRARWPGADLLDEPIVAPGSWIGGDRDGNPNVTADVVRRATGDAAYTALA HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH HYLAELTACEQELSMSARLVAVTPELAALAEDCAEKARADEPYRRALRVIRGRLTATAAE HHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ILDRRPQHELDLGLPPYATPAELRADLDTVDASLRAHGSALLADDRLALLREGVRVFGFH HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCHHHHHHH LCGLDMRQNSDVHEEVVAELLAWAGVHPDYRSLPEDERVELLAAELGTRRPLVGDRAELS HCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHH ELADKELGVVRAAAHAIRRYGPAAVPNYVISMCRSVSDVLEAAILLKEAGLIDASGPEPY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC CPVGISPLLETIEDLHNGAAILHAMLELPLYRALVAARGQSQEVMLGYSDSNKDGGYLAS CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEHH SWAVYRAELALVEVARKIGIRLRLFHGRGGTVGRGGGPSYEAILAQPPGAVNGSLRLTEQ HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECC GEVIAAKYAEPQVAQRNLESLVAATLESTLLDVEGLGDTAEPAYAVLDEVAVLAQRAYAE CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LVHETPGFVDYFMASTPVSEIGSLNIGSRPTSRKPTESIADLRAIPWVLAWSQSRVMLPG HHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEECCC WYGTGSAFEQWIAAGPQSRAERVDILHDLYRRWPFFRSVLSNLAQVLAKSDLGLAAQYAE CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHH LVDDAALRRRVFGKIADEHRRTIAMHKLITGQDNLLADNPALARSVFNRFPYLEPLNHLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VELLRRYRSGDDDELVQRGILLTMNGLASALRNSG HHHHHHHCCCCHHHHHHCCHHEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA