| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407260
Identifier: 41407260
GI number: 41407260
Start: 1218614
End: 1220359
Strand: Direct
Name: 41407260
Synonym: MAP1162
Alternate gene names: NA
Gene position: 1218614-1220359 (Clockwise)
Preceding gene: 41407259
Following gene: 41407261
Centisome position: 25.23
GC content: 67.58
Gene sequence:
>1746_bases ATGGGATTCATGACCCCGGAGTTTCCCGACGTCGACCCCCAAACCTGGACCGGCCTGCCGCGGTCGACCCGGCGGCAGAT CATGACCCGGCACTGGGTCGAGCACGGCTTCGGCTCCCCGTATGCGGTGTACCTGTTCTACGTGTTCAAGATCGCCGGCT ATATCGCCGGCGCGGCCGCGGTGATCTCGCTGACGCCGGGCCTGGGCGGGCTCGGGCGCATCGCCGACTGGTGGACGCAG CCCATCGTGTACCAGAAGCTGGTCGTCTTCACGCTGCTGTTCGAGATCCTGGGCCTGGGCTGCGGATCGGGGCCGCTGAC CGCGCGGTTCTGGCCGCCGTTCGGCGGCTTCCTGTACTGGTTGCGGCCCAACACGATTCGGCTGCCGCCGTGGCCGGACA AGGTCCCGTTCACCGCCGGGGACAGCCGCACCGTCGTCGACGTCGCGCTGTATCTGGTGGTGCTGGGCTCGGGCGTCGCG GCTCTGCTGTCGCCGGGGCGGGGCGGGCCGGTCACCGCGGCCGGCGACGTCGGCCTGATCGATCCCGTCCTGGTGGTGCC GGCCATCGTCGCGCTGGCACTGCTGGGGTTGCGGGACAAGACGATCTTTCTCGCCGCGCGGGGCGAACACTACGGATTGA CGCTGCTGGTCTTCTTTTTCGGCTTCACCGACCAGATCGCCGCCTTCAAGATCATCATGCTGGCGCTGTGGTGGGGCGCG GCGACCTCCAAGCTCAACCACCACTTCCCCTACGTGGTGGCGGTCATGATGAGCAACAGCCCGCTGCTGCGCGCCCGGGC GTTCAACTGGTTCAAACGCCGGCTCTATCTCGACCCCGTCGACGACCTGCGGCCGTCCTGGATCCCGAAGGTGATGGCCC ACGTCGGCGGCACCACCGCCGAATTCCTGGTCCCGCTGGTGCTGGTGTTCGTCGCCGACGGACACCGCTGGGCCTGGTTC CTGATCGCCTTCATGGTGCTGTTCCACCTCAACATCGCCTCCACCATTCCGATGGGAGTCCCGCTGGAGTGGAACGTCTT CTTCATCTTCTCGCTGTTCTACCTGTTCGGGCACTACGCCGGCGTCACGGCCACCGGGCTGAGCTCACCGCTGCTGCTGG GCATCCTGATCGCCGCACTGGCCGTGGTGCCGATCCTGGGAAACCTTTTCCCGCAACAGATCTCGTTCCTGCCGGCGATG CGCTACTACGCGGGCAACTGGGCCACCAGCACCTGGTGCTTCCGCAGGGGCGCCGAAGACAAGATCGAGGCCAACATCAC CAAGGCGTCGGCGCTGGTTCCCAATCAGCTTGCCCGCCTTTATGATCCGCAATCCGCCGAACTGATGATCGACAAGTTGA TGGGCTGGCGGTCGATGCACACGCACGGGCGGGCGCTGGGCGGGCTGGTGCCGCGCGCCCTGCCCGGCGGTGCCGACGAG GCCGACTACCTGCTGCGCGACGGCGAGATCGTCGCCGGCCCGCTGATCGGCTGGAACTTCGGCGAGGGCCACCTGCACAA CGAACAGCTGCTGGCCGCCGTGCAGCGCCGCTGCAACTTCGACGAGGGCGAGGTGCGGGTGATCATCCTGGAAGCCCAAC CCATCCAGCGCCAGACGCAGGCCTACCGCATCGTCGACGCCAGGACCGGGCTGATCGAAGCGGGCCACGTCGACGTCGCG AGCATGCTGAGCCGGCAGCCCTGGCCCGAGCCCGGCGACGAATACCCCGTCCACGTCCATGGCTAG
Upstream 100 bases:
>100_bases GGCGCGGCCCCGGCCGGCACCCACCGAATCGACACACCCGCCCGGCGGTGCCGATACATTCGATGGGCCAGCTGTTCGGT GCAGAGGAGCGAGGCCGCCC
Downstream 100 bases:
>100_bases GGCGGTGGTGGTCGGGGCCGGGCCCAACGGGCTGGCCGCGGCGATCCAGCTGGCCCGCCGCGGCGTCGAGGTGCAGGTGC TCGAGGCCGGCGAGACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAAVISLTPGLGGLGRIADWWTQ PIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVA ALLSPGRGGPVTAAGDVGLIDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTAEFLVPLVLVFVADGHRWAWF LIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYAGVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAM RYYAGNWATSTWCFRRGAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQAYRIVDARTGLIEAGHVDVA SMLSRQPWPEPGDEYPVHVHG
Sequences:
>Translated_581_residues MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAAVISLTPGLGGLGRIADWWTQ PIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVA ALLSPGRGGPVTAAGDVGLIDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTAEFLVPLVLVFVADGHRWAWF LIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYAGVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAM RYYAGNWATSTWCFRRGAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQAYRIVDARTGLIEAGHVDVA SMLSRQPWPEPGDEYPVHVHG >Mature_580_residues GFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAAVISLTPGLGGLGRIADWWTQP IVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAA LLSPGRGGPVTAAGDVGLIDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGAA TSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTAEFLVPLVLVFVADGHRWAWFL IAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYAGVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAMR YYAGNWATSTWCFRRGAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADEA DYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQAYRIVDARTGLIEAGHVDVAS MLSRQPWPEPGDEYPVHVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64155; Mature: 64023
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VISLTPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE LRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAGDVGLI ECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCCCCCCC DPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTA HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCHH EFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRRGAED CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC KIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE HHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQ HHHEEECCCEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH AYRIVDARTGLIEAGHVDVASMLSRQPWPEPGDEYPVHVHG HHEEEECCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEECC >Mature Secondary Structure GFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VISLTPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE LRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAGDVGLI ECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCCCCCCC DPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTA HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCHH EFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRRGAED CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC KIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE HHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQ HHHEEECCCEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH AYRIVDARTGLIEAGHVDVASMLSRQPWPEPGDEYPVHVHG HHEEEECCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA