Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407260

Identifier: 41407260

GI number: 41407260

Start: 1218614

End: 1220359

Strand: Direct

Name: 41407260

Synonym: MAP1162

Alternate gene names: NA

Gene position: 1218614-1220359 (Clockwise)

Preceding gene: 41407259

Following gene: 41407261

Centisome position: 25.23

GC content: 67.58

Gene sequence:

>1746_bases
ATGGGATTCATGACCCCGGAGTTTCCCGACGTCGACCCCCAAACCTGGACCGGCCTGCCGCGGTCGACCCGGCGGCAGAT
CATGACCCGGCACTGGGTCGAGCACGGCTTCGGCTCCCCGTATGCGGTGTACCTGTTCTACGTGTTCAAGATCGCCGGCT
ATATCGCCGGCGCGGCCGCGGTGATCTCGCTGACGCCGGGCCTGGGCGGGCTCGGGCGCATCGCCGACTGGTGGACGCAG
CCCATCGTGTACCAGAAGCTGGTCGTCTTCACGCTGCTGTTCGAGATCCTGGGCCTGGGCTGCGGATCGGGGCCGCTGAC
CGCGCGGTTCTGGCCGCCGTTCGGCGGCTTCCTGTACTGGTTGCGGCCCAACACGATTCGGCTGCCGCCGTGGCCGGACA
AGGTCCCGTTCACCGCCGGGGACAGCCGCACCGTCGTCGACGTCGCGCTGTATCTGGTGGTGCTGGGCTCGGGCGTCGCG
GCTCTGCTGTCGCCGGGGCGGGGCGGGCCGGTCACCGCGGCCGGCGACGTCGGCCTGATCGATCCCGTCCTGGTGGTGCC
GGCCATCGTCGCGCTGGCACTGCTGGGGTTGCGGGACAAGACGATCTTTCTCGCCGCGCGGGGCGAACACTACGGATTGA
CGCTGCTGGTCTTCTTTTTCGGCTTCACCGACCAGATCGCCGCCTTCAAGATCATCATGCTGGCGCTGTGGTGGGGCGCG
GCGACCTCCAAGCTCAACCACCACTTCCCCTACGTGGTGGCGGTCATGATGAGCAACAGCCCGCTGCTGCGCGCCCGGGC
GTTCAACTGGTTCAAACGCCGGCTCTATCTCGACCCCGTCGACGACCTGCGGCCGTCCTGGATCCCGAAGGTGATGGCCC
ACGTCGGCGGCACCACCGCCGAATTCCTGGTCCCGCTGGTGCTGGTGTTCGTCGCCGACGGACACCGCTGGGCCTGGTTC
CTGATCGCCTTCATGGTGCTGTTCCACCTCAACATCGCCTCCACCATTCCGATGGGAGTCCCGCTGGAGTGGAACGTCTT
CTTCATCTTCTCGCTGTTCTACCTGTTCGGGCACTACGCCGGCGTCACGGCCACCGGGCTGAGCTCACCGCTGCTGCTGG
GCATCCTGATCGCCGCACTGGCCGTGGTGCCGATCCTGGGAAACCTTTTCCCGCAACAGATCTCGTTCCTGCCGGCGATG
CGCTACTACGCGGGCAACTGGGCCACCAGCACCTGGTGCTTCCGCAGGGGCGCCGAAGACAAGATCGAGGCCAACATCAC
CAAGGCGTCGGCGCTGGTTCCCAATCAGCTTGCCCGCCTTTATGATCCGCAATCCGCCGAACTGATGATCGACAAGTTGA
TGGGCTGGCGGTCGATGCACACGCACGGGCGGGCGCTGGGCGGGCTGGTGCCGCGCGCCCTGCCCGGCGGTGCCGACGAG
GCCGACTACCTGCTGCGCGACGGCGAGATCGTCGCCGGCCCGCTGATCGGCTGGAACTTCGGCGAGGGCCACCTGCACAA
CGAACAGCTGCTGGCCGCCGTGCAGCGCCGCTGCAACTTCGACGAGGGCGAGGTGCGGGTGATCATCCTGGAAGCCCAAC
CCATCCAGCGCCAGACGCAGGCCTACCGCATCGTCGACGCCAGGACCGGGCTGATCGAAGCGGGCCACGTCGACGTCGCG
AGCATGCTGAGCCGGCAGCCCTGGCCCGAGCCCGGCGACGAATACCCCGTCCACGTCCATGGCTAG

Upstream 100 bases:

>100_bases
GGCGCGGCCCCGGCCGGCACCCACCGAATCGACACACCCGCCCGGCGGTGCCGATACATTCGATGGGCCAGCTGTTCGGT
GCAGAGGAGCGAGGCCGCCC

Downstream 100 bases:

>100_bases
GGCGGTGGTGGTCGGGGCCGGGCCCAACGGGCTGGCCGCGGCGATCCAGCTGGCCCGCCGCGGCGTCGAGGTGCAGGTGC
TCGAGGCCGGCGAGACGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 581; Mature: 580

Protein sequence:

>581_residues
MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAAVISLTPGLGGLGRIADWWTQ
PIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVA
ALLSPGRGGPVTAAGDVGLIDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA
ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTAEFLVPLVLVFVADGHRWAWF
LIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYAGVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAM
RYYAGNWATSTWCFRRGAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE
ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQAYRIVDARTGLIEAGHVDVA
SMLSRQPWPEPGDEYPVHVHG

Sequences:

>Translated_581_residues
MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAAVISLTPGLGGLGRIADWWTQ
PIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVA
ALLSPGRGGPVTAAGDVGLIDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA
ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTAEFLVPLVLVFVADGHRWAWF
LIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYAGVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAM
RYYAGNWATSTWCFRRGAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE
ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQAYRIVDARTGLIEAGHVDVA
SMLSRQPWPEPGDEYPVHVHG
>Mature_580_residues
GFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAAVISLTPGLGGLGRIADWWTQP
IVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYWLRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAA
LLSPGRGGPVTAAGDVGLIDPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGAA
TSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTAEFLVPLVLVFVADGHRWAWFL
IAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYAGVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAMR
YYAGNWATSTWCFRRGAEDKIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADEA
DYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQAYRIVDARTGLIEAGHVDVAS
MLSRQPWPEPGDEYPVHVHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64155; Mature: 64023

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VISLTPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE
LRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAGDVGLI
ECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCCCCCCC
DPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTA
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCHH
EFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRRGAED
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
KIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE
HHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC
ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQ
HHHEEECCCEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
AYRIVDARTGLIEAGHVDVASMLSRQPWPEPGDEYPVHVHG
HHEEEECCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
GFMTPEFPDVDPQTWTGLPRSTRRQIMTRHWVEHGFGSPYAVYLFYVFKIAGYIAGAAA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VISLTPGLGGLGRIADWWTQPIVYQKLVVFTLLFEILGLGCGSGPLTARFWPPFGGFLYW
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEE
LRPNTIRLPPWPDKVPFTAGDSRTVVDVALYLVVLGSGVAALLSPGRGGPVTAAGDVGLI
ECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCCCCCCC
DPVLVVPAIVALALLGLRDKTIFLAARGEHYGLTLLVFFFGFTDQIAAFKIIMLALWWGA
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ATSKLNHHFPYVVAVMMSNSPLLRARAFNWFKRRLYLDPVDDLRPSWIPKVMAHVGGTTA
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCHH
EFLVPLVLVFVADGHRWAWFLIAFMVLFHLNIASTIPMGVPLEWNVFFIFSLFYLFGHYA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
GVTATGLSSPLLLGILIAALAVVPILGNLFPQQISFLPAMRYYAGNWATSTWCFRRGAED
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
KIEANITKASALVPNQLARLYDPQSAELMIDKLMGWRSMHTHGRALGGLVPRALPGGADE
HHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC
ADYLLRDGEIVAGPLIGWNFGEGHLHNEQLLAAVQRRCNFDEGEVRVIILEAQPIQRQTQ
HHHEEECCCEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHH
AYRIVDARTGLIEAGHVDVASMLSRQPWPEPGDEYPVHVHG
HHEEEECCCCEEECCCCCHHHHHCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA