| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ppe33 [H]
Identifier: 41407251
GI number: 41407251
Start: 1208714
End: 1210078
Strand: Direct
Name: ppe33 [H]
Synonym: MAP1153
Alternate gene names: 41407251
Gene position: 1208714-1210078 (Clockwise)
Preceding gene: 41407250
Following gene: 41407252
Centisome position: 25.03
GC content: 70.55
Gene sequence:
>1365_bases ATGGTTTTCAGCGATTTCGCGACGCTGCCACCGGAGGTCATCTCCACCCAGATCCATGTCGGCCCGGGCGCCGTTCCGCT GCTGGCCGCCGCGGCGGCATGGGACGGGCTGGCCGCCGAATTGCACGGCACCGCGGCTTCCTACGCCTCGGTGATCTCGG AACTGGTCGTCGAATCGTGGCAGGGCTCGTCGTCGGGGTCCATGGCCGCCGCGGCGGCGCCCTACGTGGCGTGGCTGTCG GCCACGGCCGGCCTGGCCGAGCAGACTGCCGCTCAGGCCCGGGCCGCGGCCGCGGCCTACGAGGCGGCCGTCGCGGCCAC CGTGCCGCCGGCGGTGGTGGCGGCGAACCGCAGCCTGCTCGCCACGCTGTTGCAGACCAACATCCTGGGGCAGAACGACG CGGCGATCGCGGCGACCGAGGACGAGTACGGCCAGATGTGGGCCCAAGACGTCGCCGCCATGTTCAGCTATGCCGCCGCG TCGGAATCGGCCGGTGAGCTGACGCCGTTCGAGCAGGCGCCGGCCACCACCAATGACGCCGGACCGGCGACCCAGGCGGC CGCCGCGGCCGCGGCGGAGTCGACGTCGCTGTCGTCCTGGCTGAAACAGCTAGAGGCCTACATCACCTCGCTCACCGGCC AATACACCCAGTTCTGGCAGAACTTGATCGGCGGTGCCACGGGGAGCACGGAGATAGCACCGTTCTGGGAGACGCTGTAT TCGAGCATTTCGCAGGTCGGCACTCAGGCGACGTGGACCAACGTCGTCAATGCCACCATCGGCCTTGGGGTCTCGCAGTG GAAGAACTTCTTCATCTATGCGCCGTGGAGTGCCGCGATGGCCAAATCGTCGTTGGGCGCCGGGCTGGCGTCGCCCGGCC ACATCGCTTCCGGCATCGCGGCAAAGCCCGTATCGGCCGTGCTGGGTAATGCGCCGACAGTGGGCAAGCTGTCGGTGCCG GCCGGCTGGGCGACGGCCGCCCCGGCGATCAGGCTGGCCTCCACCGCGCTGCCGGCCACCAGCCTGGCCGCGGCCGCGGC GACGGATTTCTCGGGCCTGGTGAACGAGGCGACCCTGGGCAGTCTGGCGGGCGGCGCGCTGGGCAGCCCGGCGGCGCGCG TCGTCAGCACAACGGGCATCCCAACCCGCGCGATCACCGGCGAGCGCCGGCAGGGACCGGTCAAGCTCGACCGCATCATC GCTCAACTGCAGGAGATGCCCGAGCAGGTGCAGCACTGGAACGTCGACGAGGCCGGCCTCGACGACCTGGTCGCCAGGCT CAGGACGACGCCGGGCGTGCACGCCGTGCACGTGACGGACGGAGAGCAAGTCGCGGTCGGATCGCCCGCATCGAAACTGG GATAG
Upstream 100 bases:
>100_bases GGTCGACCGTGCGTGTGCCCGGTGCCGTGGCCGTCGACGACCTCGCGACCACGTCCACCGTCATCGTCATTCCGCCGAAC GCGAAATAGGAGATACAGCA
Downstream 100 bases:
>100_bases CGCAACGGTTTCCGCGCCGCCGCCGCACACCGCCATAGAGCATCGAAGGAGGATGCATGAAATTGCTGCTAGCGCTTCTC GGTGTAGCGCTGGGCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSSSGSMAAAAAPYVAWLS ATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAA SESAGELTPFEQAPATTNDAGPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVP AGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRII AQLQEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG
Sequences:
>Translated_454_residues MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSSSGSMAAAAAPYVAWLS ATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAA SESAGELTPFEQAPATTNDAGPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVP AGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRII AQLQEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG >Mature_454_residues MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESWQGSSSGSMAAAAAPYVAWLS ATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLLATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAA SESAGELTPFEQAPATTNDAGPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIAAKPVSAVLGNAPTVGKLSVP AGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLGSLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRII AQLQEMPEQVQHWNVDEAGLDDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022171 - InterPro: IPR000030 [H]
Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 45849; Mature: 45849
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESW CCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC QGSSSGSMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH ATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDA HHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIA HHHHHHCCCHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHHHHHHCCCCCCCCHHHCCCH AKPVSAVLGNAPTVGKLSVPAGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLG HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRIIAQLQEMPEQVQHWNVDEAGL HHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH DDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG HHHHHHHHCCCCCEEEEECCCCEEEECCCHHHCC >Mature Secondary Structure MVFSDFATLPPEVISTQIHVGPGAVPLLAAAAAWDGLAAELHGTAASYASVISELVVESW CCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC QGSSSGSMAAAAAPYVAWLSATAGLAEQTAAQARAAAAAYEAAVAATVPPAVVAANRSLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH ATLLQTNILGQNDAAIAATEDEYGQMWAQDVAAMFSYAAASESAGELTPFEQAPATTNDA HHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GPATQAAAAAAAESTSLSSWLKQLEAYITSLTGQYTQFWQNLIGGATGSTEIAPFWETLY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SSISQVGTQATWTNVVNATIGLGVSQWKNFFIYAPWSAAMAKSSLGAGLASPGHIASGIA HHHHHHCCCHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHHHHHHCCCCCCCCHHHCCCH AKPVSAVLGNAPTVGKLSVPAGWATAAPAIRLASTALPATSLAAAAATDFSGLVNEATLG HHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SLAGGALGSPAARVVSTTGIPTRAITGERRQGPVKLDRIIAQLQEMPEQVQHWNVDEAGL HHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH DDLVARLRTTPGVHAVHVTDGEQVAVGSPASKLG HHHHHHHHCCCCCEEEEECCCCEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]