| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is aroF
Identifier: 41407189
GI number: 41407189
Start: 1144613
End: 1145827
Strand: Direct
Name: aroF
Synonym: MAP1091
Alternate gene names: 41407189
Gene position: 1144613-1145827 (Clockwise)
Preceding gene: 41407188
Following gene: 41407190
Centisome position: 23.7
GC content: 75.23
Gene sequence:
>1215_bases ATGGGACCCGTGTTGCGTTGGATCACCGCCGGGGAGTCGCATGGCCGCGCGCTGGTGGCCGTGCTGGAAGGCATGGTCGC CGGGGTGGAGATCACCTCCACCGACATCTCCGAACAGTTGGCCCGGCGCCGCCTCGGGTACGGCCGCGGCGCCCGGATGA GCTTCGAGCGGGACGCGGTGAGCGTGCTGTCCGGGGTGCGGCACGGCCTCACCCTGGGCGGACCGATCGCCGTCGAGATC GGCAACACCGAATGGCCCAAGTGGGAAACCGTGATGGCCACCGACCCGGTCGACCCGGCGCAGCTGGCCGACAGCGCCCG CAACGCCCCGCTCACCCGGCCGCGGCCCGGCCACGCCGACTACGCCGGCATGCTCAAGTACGGGTTCGACGACGCCCGGC CGGTGCTGGAGCGGGCCAGCGCCCGCGAGACCGCGGCGCGGGTGGCCGCGGGCACCATCGCCCGGTCGTTCCTGCGCCAG GCGCTCGGCGTCGAGGTGCTCTCGCACGTGATCGCGATCGGCCCGTCGGCGCCGTACGAAGGGCCGCCCCCGGGCCCGGG CGACCTGCCCGCGATCGACGCCAGCCCGGTGCGCGCCTACGACGAGGCGGCGGAACAGGCGATGATCGCCGAGATCGAGG CCGCCAAGAAGGACGGCGACACCCTGGGCGGCGTGGTCGAGGTGGTGGCGCTGGGGCTGCCCGTCGGGCTGGGCTCGTTC ACCAGCGGCGACAACCGGCTGGACGGCCAGCTGGCCGCCGCGGTGATGGGCATCCAGGCGATCAAGGGGGTGGAGATCGG CGACGGTTTCGCCACCGCCCGCCGCCGCGGCAGCCAGGCCCACGACGAGATGTACCCCGGCCCCGACGGCGTGGTCCGCT CGACCAACCGGGCCGGCGGGCTGGAGGGCGGCATGACCAACGGCCAGCCGCTGCGGGTGCGCGCCGCGATGAAGCCGATC TCCACCGTGCCGCGGGCGCTGGCCACCGTCGACATGGCCACCGGCGACGAGGCCGTCGCCATCCACCAGCGCTCGGACGT GTGCGCGGTGCCGGCCGCCGGGGTGGTGGTCGAGGCCATGGTGGCGCTGGTGCTGGCCCGCGCGACGCTGCAGAAGTTCG GCGGCGACTCGCTGGCCGAGACCCGCCGCAACATCGACGCCTACCGGCGGGCGGTCGCCGAGCGCGAGGCGCCGGCCGCC CGGGGAACCGCGTGA
Upstream 100 bases:
>100_bases CGACGCGGTCCCGGGCCGGCGGCTGGCGCATCCGGCGCTGTCCCCCTCCTGAACGTGGGGGGCCTGCGCGAATCGGCCTT TCGGAACTCGACATGGGAAG
Downstream 100 bases:
>100_bases TGGCGCCCAAAGCGGTGCTGATCGGGCTGCCGGGCTCCGGCAAGTCCACCATCGGGCGGCGGCTGGCCAAGGCGCTCGGG GTGGGTTTCCTGGACACCGA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MGPVLRWITAGESHGRALVAVLEGMVAGVEITSTDISEQLARRRLGYGRGARMSFERDAVSVLSGVRHGLTLGGPIAVEI GNTEWPKWETVMATDPVDPAQLADSARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTIARSFLRQ ALGVEVLSHVIAIGPSAPYEGPPPGPGDLPAIDASPVRAYDEAAEQAMIAEIEAAKKDGDTLGGVVEVVALGLPVGLGSF TSGDNRLDGQLAAAVMGIQAIKGVEIGDGFATARRRGSQAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPI STVPRALATVDMATGDEAVAIHQRSDVCAVPAAGVVVEAMVALVLARATLQKFGGDSLAETRRNIDAYRRAVAEREAPAA RGTA
Sequences:
>Translated_404_residues MGPVLRWITAGESHGRALVAVLEGMVAGVEITSTDISEQLARRRLGYGRGARMSFERDAVSVLSGVRHGLTLGGPIAVEI GNTEWPKWETVMATDPVDPAQLADSARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTIARSFLRQ ALGVEVLSHVIAIGPSAPYEGPPPGPGDLPAIDASPVRAYDEAAEQAMIAEIEAAKKDGDTLGGVVEVVALGLPVGLGSF TSGDNRLDGQLAAAVMGIQAIKGVEIGDGFATARRRGSQAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPI STVPRALATVDMATGDEAVAIHQRSDVCAVPAAGVVVEAMVALVLARATLQKFGGDSLAETRRNIDAYRRAVAEREAPAA RGTA >Mature_403_residues GPVLRWITAGESHGRALVAVLEGMVAGVEITSTDISEQLARRRLGYGRGARMSFERDAVSVLSGVRHGLTLGGPIAVEIG NTEWPKWETVMATDPVDPAQLADSARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTIARSFLRQA LGVEVLSHVIAIGPSAPYEGPPPGPGDLPAIDASPVRAYDEAAEQAMIAEIEAAKKDGDTLGGVVEVVALGLPVGLGSFT SGDNRLDGQLAAAVMGIQAIKGVEIGDGFATARRRGSQAHDEMYPGPDGVVRSTNRAGGLEGGMTNGQPLRVRAAMKPIS TVPRALATVDMATGDEAVAIHQRSDVCAVPAAGVVVEAMVALVLARATLQKFGGDSLAETRRNIDAYRRAVAEREAPAAR GTA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=372, Percent_Identity=36.0215053763441, Blast_Score=172, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6321290, Length=380, Percent_Identity=34.2105263157895, Blast_Score=174, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_MYCPA (Q741J9)
Other databases:
- EMBL: AE016958 - RefSeq: NP_960025.1 - ProteinModelPortal: Q741J9 - SMR: Q741J9 - EnsemblBacteria: EBMYCT00000036667 - GeneID: 2720000 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP1091 - NMPDR: fig|262316.1.peg.1091 - GeneTree: EBGT00050000016560 - HOGENOM: HBG292336 - OMA: GSEAHDE - ProtClustDB: PRK05382 - BRENDA: 4.2.3.5 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 42014; Mature: 41883
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPVLRWITAGESHGRALVAVLEGMVAGVEITSTDISEQLARRRLGYGRGARMSFERDAV CCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHH SVLSGVRHGLTLGGPIAVEIGNTEWPKWETVMATDPVDPAQLADSARNAPLTRPRPGHAD HHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC YAGMLKYGFDDARPVLERASARETAARVAAGTIARSFLRQALGVEVLSHVIAIGPSAPYE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPPPGPGDLPAIDASPVRAYDEAAEQAMIAEIEAAKKDGDTLGGVVEVVALGLPVGLGSF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC TSGDNRLDGQLAAAVMGIQAIKGVEIGDGFATARRRGSQAHDEMYPGPDGVVRSTNRAGG CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCEECCCCCCC LEGGMTNGQPLRVRAAMKPISTVPRALATVDMATGDEAVAIHQRSDVCAVPAAGVVVEAM CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCHHHHHHHHH VALVLARATLQKFGGDSLAETRRNIDAYRRAVAEREAPAARGTA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GPVLRWITAGESHGRALVAVLEGMVAGVEITSTDISEQLARRRLGYGRGARMSFERDAV CCCEEEEECCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHH SVLSGVRHGLTLGGPIAVEIGNTEWPKWETVMATDPVDPAQLADSARNAPLTRPRPGHAD HHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC YAGMLKYGFDDARPVLERASARETAARVAAGTIARSFLRQALGVEVLSHVIAIGPSAPYE HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPPPGPGDLPAIDASPVRAYDEAAEQAMIAEIEAAKKDGDTLGGVVEVVALGLPVGLGSF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC TSGDNRLDGQLAAAVMGIQAIKGVEIGDGFATARRRGSQAHDEMYPGPDGVVRSTNRAGG CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCEECCCCCCC LEGGMTNGQPLRVRAAMKPISTVPRALATVDMATGDEAVAIHQRSDVCAVPAAGVVVEAM CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCHHHHHHHHH VALVLARATLQKFGGDSLAETRRNIDAYRRAVAEREAPAARGTA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA