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The map label for this gene is ddpC [H]

Identifier: 41407187

GI number: 41407187

Start: 1142132

End: 1142938

Strand: Direct

Name: ddpC [H]

Synonym: MAP1089

Alternate gene names: 41407187

Gene position: 1142132-1142938 (Clockwise)

Preceding gene: 41407186

Following gene: 41407188

Centisome position: 23.65

GC content: 71.75

Gene sequence:

>807_bases
ATGAGCGCGCGCAGGGCGTCCTGGCCGGTGCGGATCTCCGCGGCGGTGCTGATCCTGACCGCCGCCTGGGCGGCGGCTCC
AGGGCTGTTCACCGATCGAAACCCGTTGAAGGGCAGGCCGGTTGACAAGTTCCAGCCGCCGAGCGCGGCGCACTGGTTCG
GCACCGACCACCTGGGCCGCGACGTGCTGACCCGGGTCATCTACGGAACCTCGCACACCGTCGCCACCGCGGGGTTGGCG
GTGGCGGTGGGGCTGCTGCTCGGCAGTGCCGTCGGCATCGCCGCCGGCGTCAGCGGACCCGTGGTCGATGCCGTCGCCAT
GCGAGCGTCCGACGTGTTGCTGGCGCTGCCGGGGTTCCTGACGTCGGTGTGGATCGTCACCGCCTACGGCCCCGGACCGC
TGTCGGTCGGCATCGGTGTGGGCATCGGATCGATCGCCGTCTTCGCGCGGGTGTTTCGCGCCGAAGTGCTGCGGGTGCGG
GCGCTGGACTACGTCGAGGCCGCCTTCCTGTCCGGCGAGACCCGCTGGTCGGTCATCCGCCGCCACATCGTTCCCAACGC
CGCCGGCGCCGTGATCGCGCTGGCGGTGATCGATCTCAGCGGTGCGATCCTACTGATCTCGGCGTTGGGTTACCTCGGCT
ACAGCGCCCCGCCGCCGACACCGGAGTGGGGACTGCTGGTCGCCGAGGGCCGCCGCTATCTGGCCACCGCGTGGTGGCTG
TCCACCCTGCCCGGCGCCGTCGTCCTGTCGGTGATCCTGGCGCTCGGCGTGCTCAGCCGCCGGGCGCTGACGTCGCACCG
CATCTGA

Upstream 100 bases:

>100_bases
TGACGGCCAACCTGGCGGTGGACCTGATCCATCCGCTGCTCGACCCGCGGGTCACCCGGGTGCAGCGCCGCGGGTTCACC
ACCCGGCTGGGCAGGTTCGG

Downstream 100 bases:

>100_bases
ACGAGAAGAGAACGCACAATGGGTCCACCGCTGCTCGACGTGTCCGGTCTGACCGTGACCTATCCCGGTGCGGTGCCCAG
GGTGGCGCTGGACCGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSARRASWPVRISAAVLILTAAWAAAPGLFTDRNPLKGRPVDKFQPPSAAHWFGTDHLGRDVLTRVIYGTSHTVATAGLA
VAVGLLLGSAVGIAAGVSGPVVDAVAMRASDVLLALPGFLTSVWIVTAYGPGPLSVGIGVGIGSIAVFARVFRAEVLRVR
ALDYVEAAFLSGETRWSVIRRHIVPNAAGAVIALAVIDLSGAILLISALGYLGYSAPPPTPEWGLLVAEGRRYLATAWWL
STLPGAVVLSVILALGVLSRRALTSHRI

Sequences:

>Translated_268_residues
MSARRASWPVRISAAVLILTAAWAAAPGLFTDRNPLKGRPVDKFQPPSAAHWFGTDHLGRDVLTRVIYGTSHTVATAGLA
VAVGLLLGSAVGIAAGVSGPVVDAVAMRASDVLLALPGFLTSVWIVTAYGPGPLSVGIGVGIGSIAVFARVFRAEVLRVR
ALDYVEAAFLSGETRWSVIRRHIVPNAAGAVIALAVIDLSGAILLISALGYLGYSAPPPTPEWGLLVAEGRRYLATAWWL
STLPGAVVLSVILALGVLSRRALTSHRI
>Mature_267_residues
SARRASWPVRISAAVLILTAAWAAAPGLFTDRNPLKGRPVDKFQPPSAAHWFGTDHLGRDVLTRVIYGTSHTVATAGLAV
AVGLLLGSAVGIAAGVSGPVVDAVAMRASDVLLALPGFLTSVWIVTAYGPGPLSVGIGVGIGSIAVFARVFRAEVLRVRA
LDYVEAAFLSGETRWSVIRRHIVPNAAGAVIALAVIDLSGAILLISALGYLGYSAPPPTPEWGLLVAEGRRYLATAWWLS
TLPGAVVLSVILALGVLSRRALTSHRI

Specific function: Part of the ABC transporter complex ddpABCDF, which is probably involved in D,D-dipeptide transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=207, Percent_Identity=37.6811594202899, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787054, Length=212, Percent_Identity=34.4339622641509, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1789964, Length=231, Percent_Identity=34.6320346320346, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1789889, Length=235, Percent_Identity=28.936170212766, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=30.6666666666667, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787549, Length=258, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787498, Length=211, Percent_Identity=29.3838862559242, Blast_Score=87, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27906; Mature: 27775

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARRASWPVRISAAVLILTAAWAAAPGLFTDRNPLKGRPVDKFQPPSAAHWFGTDHLGR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
DVLTRVIYGTSHTVATAGLAVAVGLLLGSAVGIAAGVSGPVVDAVAMRASDVLLALPGFL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TSVWIVTAYGPGPLSVGIGVGIGSIAVFARVFRAEVLRVRALDYVEAAFLSGETRWSVIR
HHEEEEEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RHIVPNAAGAVIALAVIDLSGAILLISALGYLGYSAPPPTPEWGLLVAEGRRYLATAWWL
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHH
STLPGAVVLSVILALGVLSRRALTSHRI
HHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SARRASWPVRISAAVLILTAAWAAAPGLFTDRNPLKGRPVDKFQPPSAAHWFGTDHLGR
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
DVLTRVIYGTSHTVATAGLAVAVGLLLGSAVGIAAGVSGPVVDAVAMRASDVLLALPGFL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TSVWIVTAYGPGPLSVGIGVGIGSIAVFARVFRAEVLRVRALDYVEAAFLSGETRWSVIR
HHEEEEEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RHIVPNAAGAVIALAVIDLSGAILLISALGYLGYSAPPPTPEWGLLVAEGRRYLATAWWL
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHH
STLPGAVVLSVILALGVLSRRALTSHRI
HHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]