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The map label for this gene is glnR [H]

Identifier: 41406747

GI number: 41406747

Start: 670362

End: 671144

Strand: Direct

Name: glnR [H]

Synonym: MAP0649

Alternate gene names: 41406747

Gene position: 670362-671144 (Clockwise)

Preceding gene: 41406740

Following gene: 41406748

Centisome position: 13.88

GC content: 71.01

Gene sequence:

>783_bases
TTGGAGCTACTACTGCTGACCCCGGAGCTGCATCCCGATCCGGTCCTGCCGTCGTTGTCGCTGCTGGCGCACACCGTGCG
AACCGCGCCGCCCGAACCTTCCTCGCTGCTCGAGGCCGGAACGGCCGACGCCGTCATCGTCGACGCGCGCACCGATTTGT
CGTCGGCGCGCGGGCTGTGCCGGCTGCTGAGCACGGCCGGCCGGTCGGTTCCGGTGTTGGCGGTGGTCAGCGAGGGCGGG
CTGGTGGCCGTCAACTCGGACTGGGGTCTGGACGAGATCCTGCTGCCCACCACCGGGCCCGCCGAGGTCGATGCGCGGCT
GCGGCTGGTGGTCGGGCGCCGGGGCGGGCTGGCGGACCAGGAAAGCGCCGGCAAGGTCACCCTGGGCGAGTTGGTGATCG
ACGAGGGCACCTATACCGCCCGGTTGCGCGGCCGCCCGCTTGACCTCACCTACAAGGAATTCGAGTTGCTCAAATACCTG
GCCCAGCACGCCGGCCGGGTGTTCACCCGCGCTCAGCTGCTGCACGAGGTGTGGGGATACGACTTCTTCGGCGGCACCCG
CACCGTCGACGTGCACGTGCGCCGGCTGCGGGCCAAGCTGGGGCCCGAGTACGAGGCGCTGATCGGCACCGTGCGCAACG
TCGGCTACAAGGCCGTGCGCCCGGCCCGCGGCCGTCCGCCGGTGGCCGAGGCCGACGACGCCGAGTCCGAGTCCGACTCC
GCGTCCGAATCCGACGCCGAGGACGTCCACGATCCGCTGGTCGATCCGTTGCACACTCAGTGA

Upstream 100 bases:

>100_bases
TGCCACGCGAAAAAACCAGGTGACACGTTATCGTTAGATGACCTGGTCATGATGGCGTTGAGAATTGGGAGATGCCGTTC
CCCCGAACTGGAGGGACTAG

Downstream 100 bases:

>100_bases
CCGCGGCTGACTGGCGCCGCACGCTGAATCCGCAGGAGCAGCGCGAGGTGCGCGAACTCGTCGGTGCGGCAACCGAATTC
GATGCGGTGGCGCCCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MELLLLTPELHPDPVLPSLSLLAHTVRTAPPEPSSLLEAGTADAVIVDARTDLSSARGLCRLLSTAGRSVPVLAVVSEGG
LVAVNSDWGLDEILLPTTGPAEVDARLRLVVGRRGGLADQESAGKVTLGELVIDEGTYTARLRGRPLDLTYKEFELLKYL
AQHAGRVFTRAQLLHEVWGYDFFGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRPARGRPPVAEADDAESESDS
ASESDAEDVHDPLVDPLHTQ

Sequences:

>Translated_260_residues
MELLLLTPELHPDPVLPSLSLLAHTVRTAPPEPSSLLEAGTADAVIVDARTDLSSARGLCRLLSTAGRSVPVLAVVSEGG
LVAVNSDWGLDEILLPTTGPAEVDARLRLVVGRRGGLADQESAGKVTLGELVIDEGTYTARLRGRPLDLTYKEFELLKYL
AQHAGRVFTRAQLLHEVWGYDFFGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRPARGRPPVAEADDAESESDS
ASESDAEDVHDPLVDPLHTQ
>Mature_260_residues
MELLLLTPELHPDPVLPSLSLLAHTVRTAPPEPSSLLEAGTADAVIVDARTDLSSARGLCRLLSTAGRSVPVLAVVSEGG
LVAVNSDWGLDEILLPTTGPAEVDARLRLVVGRRGGLADQESAGKVTLGELVIDEGTYTARLRGRPLDLTYKEFELLKYL
AQHAGRVFTRAQLLHEVWGYDFFGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRPARGRPPVAEADDAESESDS
ASESDAEDVHDPLVDPLHTQ

Specific function: Activates the transcription of the glnA gene [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786784, Length=180, Percent_Identity=32.2222222222222, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786599, Length=158, Percent_Identity=32.2784810126582, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788394, Length=211, Percent_Identity=29.8578199052133, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=31.2217194570136, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082012, Length=134, Percent_Identity=33.5820895522388, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790860, Length=179, Percent_Identity=31.8435754189944, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789809, Length=170, Percent_Identity=28.8235294117647, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28007; Mature: 28007

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLLLTPELHPDPVLPSLSLLAHTVRTAPPEPSSLLEAGTADAVIVDARTDLSSARGLC
CEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHH
RLLSTAGRSVPVLAVVSEGGLVAVNSDWGLDEILLPTTGPAEVDARLRLVVGRRGGLADQ
HHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCC
ESAGKVTLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY
CCCCCEEEHHEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFFGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRPARGRPPVAEADDAESESDS
CCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
ASESDAEDVHDPLVDPLHTQ
CCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELLLLTPELHPDPVLPSLSLLAHTVRTAPPEPSSLLEAGTADAVIVDARTDLSSARGLC
CEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHH
RLLSTAGRSVPVLAVVSEGGLVAVNSDWGLDEILLPTTGPAEVDARLRLVVGRRGGLADQ
HHHHHCCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCC
ESAGKVTLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLHEVWGY
CCCCCEEEHHEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFFGGTRTVDVHVRRLRAKLGPEYEALIGTVRNVGYKAVRPARGRPPVAEADDAESESDS
CCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
ASESDAEDVHDPLVDPLHTQ
CCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7688332; 12000953 [H]