| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406681
Identifier: 41406681
GI number: 41406681
Start: 608663
End: 609331
Strand: Direct
Name: 41406681
Synonym: MAP0583
Alternate gene names: NA
Gene position: 608663-609331 (Clockwise)
Preceding gene: 41406680
Following gene: 41406682
Centisome position: 12.6
GC content: 69.96
Gene sequence:
>669_bases GTGACCGTGTCGTGGCTGCGGGGGTCGGGGCTCGTCGGGGCGGTGTTGGTGGCCGCCACGGCGGTGGCGAAAACCGCGGG CGCGGCACCCCCTCCGGCCCTGCCGGCCCCGCCGCCGTCGCCGGGCATCGGCGTCGATCACGAAAACGGCAGGTGCACAG CCGGATTCGCCGCCCAGGGTTCCGACGGCAGCTACTACCTGATGACCAGTGGGCACTGCGACGCGCACGACGGCGCGGAG TGGACGTACGGGAACGACGCTCCGCTGGGCAGGATCTCGGCCAGTGAACACGAGGGCGACAAGCGGGACGCCGCGATCAT CCGGCTCGAGCCGAGCGTCGGCATGCCCGTCGGTGACGTCGGTGGCAGGTATCAGGTGCGGGATGTGTTGAGCCGCCCGC AGATTCAGGTCGGCATGCCGTTCTGCAAGATCGGGGCGGTCACCGGGGAGACGTGCGGTGCCATCAAGGGGGTCGACGGC GACGTCGTCGAGGCCAGCGTGTTCAGCCTGGACGGCGACAGCGGCAGCCCGGGGTTCGTGATGAATCCCGACGGCAGCGT GAGCGCGGTGGGCCTGTTGATGTCCTCGCCCGACGGGGACGACTACACCACCTACTTCATGCTGGTCAATCCGCTGCTGG ACCGGTGGGGCCTGCGGATTCTGCCGTGA
Upstream 100 bases:
>100_bases CGCCTCGACGTCGAATGAACCACGGGAAGGGCTGGGCGCCGGCCTCTTTCGGCCCGGCGGCGCTGCTACTATCTGCCGGG CGCAAGCGGAGAAGGGCGGC
Downstream 100 bases:
>100_bases CGTTTGCGCATCTGGGGCATGGGGTATCCGCCGGACCGGCCTCGAACGCGTCGGCCCCGGGACCGTTGACGGGCTGTCGG CGCGGCCAACGGCAAGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTVSWLRGSGLVGAVLVAATAVAKTAGAAPPPALPAPPPSPGIGVDHENGRCTAGFAAQGSDGSYYLMTSGHCDAHDGAE WTYGNDAPLGRISASEHEGDKRDAAIIRLEPSVGMPVGDVGGRYQVRDVLSRPQIQVGMPFCKIGAVTGETCGAIKGVDG DVVEASVFSLDGDSGSPGFVMNPDGSVSAVGLLMSSPDGDDYTTYFMLVNPLLDRWGLRILP
Sequences:
>Translated_222_residues MTVSWLRGSGLVGAVLVAATAVAKTAGAAPPPALPAPPPSPGIGVDHENGRCTAGFAAQGSDGSYYLMTSGHCDAHDGAE WTYGNDAPLGRISASEHEGDKRDAAIIRLEPSVGMPVGDVGGRYQVRDVLSRPQIQVGMPFCKIGAVTGETCGAIKGVDG DVVEASVFSLDGDSGSPGFVMNPDGSVSAVGLLMSSPDGDDYTTYFMLVNPLLDRWGLRILP >Mature_221_residues TVSWLRGSGLVGAVLVAATAVAKTAGAAPPPALPAPPPSPGIGVDHENGRCTAGFAAQGSDGSYYLMTSGHCDAHDGAEW TYGNDAPLGRISASEHEGDKRDAAIIRLEPSVGMPVGDVGGRYQVRDVLSRPQIQVGMPFCKIGAVTGETCGAIKGVDGD VVEASVFSLDGDSGSPGFVMNPDGSVSAVGLLMSSPDGDDYTTYFMLVNPLLDRWGLRILP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22775; Mature: 22644
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSWLRGSGLVGAVLVAATAVAKTAGAAPPPALPAPPPSPGIGVDHENGRCTAGFAAQG CEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC SDGSYYLMTSGHCDAHDGAEWTYGNDAPLGRISASEHEGDKRDAAIIRLEPSVGMPVGDV CCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC GGRYQVRDVLSRPQIQVGMPFCKIGAVTGETCGAIKGVDGDVVEASVFSLDGDSGSPGFV CCEEEHHHHHCCCCEEECCCEEEECCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCEE MNPDGSVSAVGLLMSSPDGDDYTTYFMLVNPLLDRWGLRILP ECCCCCEEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCEECC >Mature Secondary Structure TVSWLRGSGLVGAVLVAATAVAKTAGAAPPPALPAPPPSPGIGVDHENGRCTAGFAAQG EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC SDGSYYLMTSGHCDAHDGAEWTYGNDAPLGRISASEHEGDKRDAAIIRLEPSVGMPVGDV CCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC GGRYQVRDVLSRPQIQVGMPFCKIGAVTGETCGAIKGVDGDVVEASVFSLDGDSGSPGFV CCEEEHHHHHCCCCEEECCCEEEECCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCEE MNPDGSVSAVGLLMSSPDGDDYTTYFMLVNPLLDRWGLRILP ECCCCCEEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA