| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is mce4
Identifier: 41406662
GI number: 41406662
Start: 588158
End: 589297
Strand: Direct
Name: mce4
Synonym: MAP0564
Alternate gene names: NA
Gene position: 588158-589297 (Clockwise)
Preceding gene: 41406661
Following gene: 41406663
Centisome position: 12.18
GC content: 65.18
Gene sequence:
>1140_bases ATGGTGGCTTTCGCTGTGCTGACCTATCTTTCGTACACGGCGGCCTTCGCGCCGATCGACACCGTCACCGTGTCCGCGCC CCGCGCCGGGCTGGTGATGGAGCAGGGCGCCAAGGTCAAATACCGCGGCATCCAGATCGGCAAGGTCGAGGCCATCGAGT ACTCCGGCGACCAGGCGCGGCTGACGCTGGGCATCAACAGCAAGGACATGCATTTCATCCCGTCCAACGCCACCGTGCAC ATCGCCGGTAACACCATCTTCGGCGCCAAGGCGGTGGAATTCATTCCGCCGCAAACACCTTCGCCGACCTCCCTGCGCCC GGACGCCCACGTCGCGGCCACCTCGGTGCAGCTGGAGGTCAATACCTTGTTCCAGTCGCTGATCGACCTGCTGCACAAGA TCGACCCGGTCGAACTCAACGGAACGCTGAGCGCGTTCTCCGAAGGCCTGCGCGGCCACGGTGACGACCTGGGCGGCATC CTGTCGGGGCTGAATACGCTGACCCGCCAAGCGAATCCGAAGCTGCCGGCGTTGCAGGAGGACTTCCGCAAGACCGCGGT CGTCAGCAACGTCTACGCCGACGCCGCGCCAGACCTGAACACCGTCTTCGACAACCTGCCCACGATCAACAAGACCGTGG TGGACCAGCAGAAGAACCTCGACACCACGCTGCTGGCCACCATCGGCCTGGCGAACAACGCCTATGACACGTTGGCCCCG GCCGAGCAGGACTTCATCGACACCATCAACCGGGTGCGGGCCCCGCTGAAGGTGGCCGCCGACTATTCACCGGAATTCGG TTGCCTGTTCGCCGGCATCGAGCGCGGCATCAAGGAATTCGCCCCGCTGCTCGGCGTCCGCAAGGCGGGCCTGTTCACCT CGTCCAGCTTCGTGCTGGGCGCGCCGTCGTACACCTATCCCGAATCGCTGCCGATCGTCAACGCCTCCGGCGGGCCGAAC TGCCGTGGGCTGCCGGACATCCCGACCAAGCAGACCGGCGGCTCGTTCTACCGGGCGCCGTTCCTGGTCACCGACAACGC CAACATCCCGTACGAGCCGTTCACCGAACTGCAGGTCGACGCGCCCTCCACGCTGCAGTTCTTGTTCCACGGCGCCTTCG CGGAACGGGACGACTTCTAA
Upstream 100 bases:
>100_bases CAACCTCTCCGGATAAGAGAACCGCTTAACAAGGGACATGGCAGACACAGGAGCGCGACGCACCACCGTCCGGCTGGCCG CAGCAGTGCTGGCCGGCCTG
Downstream 100 bases:
>100_bases TGGCCGGCTCGGGAATGCCCTCGCACCGCTCGATGATGATCAAGGTCAGCATCTTCGCGGCGGCCATGCTGTTGGTGTCG GCCGGACTGGTGGTGGTCTT
Product: Mce4
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE Family Protein; MCE-Family Protein; Mce Family A; Mce-Related Protein; Cell Invasion Protein; MCE-Family; Virulence Factor MCE-Like Protein
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MVAFAVLTYLSYTAAFAPIDTVTVSAPRAGLVMEQGAKVKYRGIQIGKVEAIEYSGDQARLTLGINSKDMHFIPSNATVH IAGNTIFGAKAVEFIPPQTPSPTSLRPDAHVAATSVQLEVNTLFQSLIDLLHKIDPVELNGTLSAFSEGLRGHGDDLGGI LSGLNTLTRQANPKLPALQEDFRKTAVVSNVYADAAPDLNTVFDNLPTINKTVVDQQKNLDTTLLATIGLANNAYDTLAP AEQDFIDTINRVRAPLKVAADYSPEFGCLFAGIERGIKEFAPLLGVRKAGLFTSSSFVLGAPSYTYPESLPIVNASGGPN CRGLPDIPTKQTGGSFYRAPFLVTDNANIPYEPFTELQVDAPSTLQFLFHGAFAERDDF
Sequences:
>Translated_379_residues MVAFAVLTYLSYTAAFAPIDTVTVSAPRAGLVMEQGAKVKYRGIQIGKVEAIEYSGDQARLTLGINSKDMHFIPSNATVH IAGNTIFGAKAVEFIPPQTPSPTSLRPDAHVAATSVQLEVNTLFQSLIDLLHKIDPVELNGTLSAFSEGLRGHGDDLGGI LSGLNTLTRQANPKLPALQEDFRKTAVVSNVYADAAPDLNTVFDNLPTINKTVVDQQKNLDTTLLATIGLANNAYDTLAP AEQDFIDTINRVRAPLKVAADYSPEFGCLFAGIERGIKEFAPLLGVRKAGLFTSSSFVLGAPSYTYPESLPIVNASGGPN CRGLPDIPTKQTGGSFYRAPFLVTDNANIPYEPFTELQVDAPSTLQFLFHGAFAERDDF >Mature_379_residues MVAFAVLTYLSYTAAFAPIDTVTVSAPRAGLVMEQGAKVKYRGIQIGKVEAIEYSGDQARLTLGINSKDMHFIPSNATVH IAGNTIFGAKAVEFIPPQTPSPTSLRPDAHVAATSVQLEVNTLFQSLIDLLHKIDPVELNGTLSAFSEGLRGHGDDLGGI LSGLNTLTRQANPKLPALQEDFRKTAVVSNVYADAAPDLNTVFDNLPTINKTVVDQQKNLDTTLLATIGLANNAYDTLAP AEQDFIDTINRVRAPLKVAADYSPEFGCLFAGIERGIKEFAPLLGVRKAGLFTSSSFVLGAPSYTYPESLPIVNASGGPN CRGLPDIPTKQTGGSFYRAPFLVTDNANIPYEPFTELQVDAPSTLQFLFHGAFAERDDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40650; Mature: 40650
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAFAVLTYLSYTAAFAPIDTVTVSAPRAGLVMEQGAKVKYRGIQIGKVEAIEYSGDQAR CHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEECEEECEEEEEEECCCCEE LTLGINSKDMHFIPSNATVHIAGNTIFGAKAVEFIPPQTPSPTSLRPDAHVAATSVQLEV EEEECCCCCCEEECCCCEEEEECCEEECCCCEEECCCCCCCCCCCCCCCEEEEEEEEEEH NTLFQSLIDLLHKIDPVELNGTLSAFSEGLRGHGDDLGGILSGLNTLTRQANPKLPALQE HHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH DFRKTAVVSNVYADAAPDLNTVFDNLPTINKTVVDQQKNLDTTLLATIGLANNAYDTLAP HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHCCCCCEEEEEHHCCCCCCHHCCC AEQDFIDTINRVRAPLKVAADYSPEFGCLFAGIERGIKEFAPLLGVRKAGLFTSSSFVLG CHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEE APSYTYPESLPIVNASGGPNCRGLPDIPTKQTGGSFYRAPFLVTDNANIPYEPFTELQVD CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCEEEC APSTLQFLFHGAFAERDDF CCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVAFAVLTYLSYTAAFAPIDTVTVSAPRAGLVMEQGAKVKYRGIQIGKVEAIEYSGDQAR CHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEECEEECEEEEEEECCCCEE LTLGINSKDMHFIPSNATVHIAGNTIFGAKAVEFIPPQTPSPTSLRPDAHVAATSVQLEV EEEECCCCCCEEECCCCEEEEECCEEECCCCEEECCCCCCCCCCCCCCCEEEEEEEEEEH NTLFQSLIDLLHKIDPVELNGTLSAFSEGLRGHGDDLGGILSGLNTLTRQANPKLPALQE HHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH DFRKTAVVSNVYADAAPDLNTVFDNLPTINKTVVDQQKNLDTTLLATIGLANNAYDTLAP HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHCCCCCEEEEEHHCCCCCCHHCCC AEQDFIDTINRVRAPLKVAADYSPEFGCLFAGIERGIKEFAPLLGVRKAGLFTSSSFVLG CHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEE APSYTYPESLPIVNASGGPNCRGLPDIPTKQTGGSFYRAPFLVTDNANIPYEPFTELQVD CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCEEEC APSTLQFLFHGAFAERDDF CCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA