| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406650
Identifier: 41406650
GI number: 41406650
Start: 577568
End: 578395
Strand: Direct
Name: 41406650
Synonym: MAP0552
Alternate gene names: NA
Gene position: 577568-578395 (Clockwise)
Preceding gene: 41406649
Following gene: 41406651
Centisome position: 11.96
GC content: 68.96
Gene sequence:
>828_bases ATGACGATCGATGTGTGGATGCAGCATCCCACCGTCAGGTTCCTGCGCAGCGACATGCTGGCCTCGCTGCGGCGCTGGAC CGGCGGGTCGATCCCCGACACCGACATCCCCATCGAGGCGACCCTGGCATCGATGGACGCCGCCGGCGTGCGCTACGGGC TGCTCAGCGCCTGGCGCGGTCCCAACGGGCAGGATCTGGTGTCCAACGACGAGGTGGCGCAATGGGTTGCCGCGCACCCG AATCGGTTCGCCGGCCTGGCCGCCGTCGACCTGGACCGCCCGATGGAAGCCGTCCGCGAGCTGCGACGCCGGATCGCCGA CGGCGGATTCGTCGGCCTGCGGGTGGTGCCGTGGCTGTGGAACGCCCCGCCCACCGATCGCCGCTACTACCCGCTGTTCG CCGCGTGCGTGGAGGCCGGGGTGCCGTTCTGCACCCAGGTCGGGCACACCGGCCCGCTGCGGCCGTCGGAGACCGGCCGC CCGATTCCCTACATCGACCAGGTGGCCCTGGACTTCCCGGAGCTGGTGATCGTCTGCGGCCACGTCGGCTACCCGTGGAC CGAGGAGATGGTCGCGGTGGCCCGCAAGCACGAGAACGTCTACATCGACACCTCGGCCTACACCATCGAGCGGTTGCCGG ACGAACTCGTCAGGTTCATCAAAACCGGGACCGGGCAGCGAAAAGTGTTGTTCGGCACCAACTATCCGATGATCACCGCC GAGCACGCGCTGGCGGGACTGGACGGACTCGGGCTGTCCGACGAGGCCCGGCGGGATTTCCTGCACGGCAATGCCGAGCG GGTGTTCAGACTGGAGGCAGCCACGTGA
Upstream 100 bases:
>100_bases CTGGCGCACGTGGTGCTGTTCGGCGGCGGCTACGCGGGCCAGACGGACGCCGCGGCCCGCGCCGCGCTGGCCGCATGACC CGGGTCTAGAGTCTGGTCGC
Downstream 100 bases:
>100_bases ACGGTGCTCAGGCGCTGATCCGGACCCTGGTCGACGGCGGCGTCGACGTGTGTTTCGCCAACCCGGGCACGTCGGAAATG CACTTCGTCGCGGCGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidase; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Hydrolase; Antibiotic-Resistance Protein; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTIDVWMQHPTVRFLRSDMLASLRRWTGGSIPDTDIPIEATLASMDAAGVRYGLLSAWRGPNGQDLVSNDEVAQWVAAHP NRFAGLAAVDLDRPMEAVRELRRRIADGGFVGLRVVPWLWNAPPTDRRYYPLFAACVEAGVPFCTQVGHTGPLRPSETGR PIPYIDQVALDFPELVIVCGHVGYPWTEEMVAVARKHENVYIDTSAYTIERLPDELVRFIKTGTGQRKVLFGTNYPMITA EHALAGLDGLGLSDEARRDFLHGNAERVFRLEAAT
Sequences:
>Translated_275_residues MTIDVWMQHPTVRFLRSDMLASLRRWTGGSIPDTDIPIEATLASMDAAGVRYGLLSAWRGPNGQDLVSNDEVAQWVAAHP NRFAGLAAVDLDRPMEAVRELRRRIADGGFVGLRVVPWLWNAPPTDRRYYPLFAACVEAGVPFCTQVGHTGPLRPSETGR PIPYIDQVALDFPELVIVCGHVGYPWTEEMVAVARKHENVYIDTSAYTIERLPDELVRFIKTGTGQRKVLFGTNYPMITA EHALAGLDGLGLSDEARRDFLHGNAERVFRLEAAT >Mature_274_residues TIDVWMQHPTVRFLRSDMLASLRRWTGGSIPDTDIPIEATLASMDAAGVRYGLLSAWRGPNGQDLVSNDEVAQWVAAHPN RFAGLAAVDLDRPMEAVRELRRRIADGGFVGLRVVPWLWNAPPTDRRYYPLFAACVEAGVPFCTQVGHTGPLRPSETGRP IPYIDQVALDFPELVIVCGHVGYPWTEEMVAVARKHENVYIDTSAYTIERLPDELVRFIKTGTGQRKVLFGTNYPMITAE HALAGLDGLGLSDEARRDFLHGNAERVFRLEAAT
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30568; Mature: 30437
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDVWMQHPTVRFLRSDMLASLRRWTGGSIPDTDIPIEATLASMDAAGVRYGLLSAWRG CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PNGQDLVSNDEVAQWVAAHPNRFAGLAAVDLDRPMEAVRELRRRIADGGFVGLRVVPWLW CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECEEC NAPPTDRRYYPLFAACVEAGVPFCTQVGHTGPLRPSETGRPIPYIDQVALDFPELVIVCG CCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHEEEEC HVGYPWTEEMVAVARKHENVYIDTSAYTIERLPDELVRFIKTGTGQRKVLFGTNYPMITA CCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCEEEH EHALAGLDGLGLSDEARRDFLHGNAERVFRLEAAT HHHHHCCCCCCCCHHHHHHHHCCCHHHEEEEECCC >Mature Secondary Structure TIDVWMQHPTVRFLRSDMLASLRRWTGGSIPDTDIPIEATLASMDAAGVRYGLLSAWRG EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PNGQDLVSNDEVAQWVAAHPNRFAGLAAVDLDRPMEAVRELRRRIADGGFVGLRVVPWLW CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECEEC NAPPTDRRYYPLFAACVEAGVPFCTQVGHTGPLRPSETGRPIPYIDQVALDFPELVIVCG CCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHEEEEC HVGYPWTEEMVAVARKHENVYIDTSAYTIERLPDELVRFIKTGTGQRKVLFGTNYPMITA CCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCEEEH EHALAGLDGLGLSDEARRDFLHGNAERVFRLEAAT HHHHHCCCCCCCCHHHHHHHHCCCHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA