| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mhpE [C]
Identifier: 41406631
GI number: 41406631
Start: 559373
End: 560431
Strand: Direct
Name: mhpE [C]
Synonym: MAP0533
Alternate gene names: 41406631
Gene position: 559373-560431 (Clockwise)
Preceding gene: 41406630
Following gene: 41406632
Centisome position: 11.58
GC content: 68.93
Gene sequence:
>1059_bases ATGACTACCGATATCTTCTTCAACCCGATTTGGGACGTCCGGCTGACCGACACGTCGCTGCGCGACGGCAGCCACCACAA GCGCCACCAGTTCACCAAGGACGAGGTGCAAGCCATCGTCGCGGCCCTGGACGCCGCGGGGGTGCCGGTCATCGAGGTCA CCCACGGCGACGGGCTGGGCGGCTCGAGCTTCAACTACGGGTTCTCCAAGACCCCCGAGCAGGAGCTGATCAAGCTGGCC GCCGAGACCGCCAAGGACGCCAAGATCGCCTTCCTGATGCTGCCCGGGGTGGGCACCAAGGAGGACATCAAGGAGGCCCA GAACAACGGCGGCTCGATCTGCCGGATCGCCACGCACTGCACCGAGGCCGACGTGTCCATCCAGCACTTCGGCCTGGCCC GCGAACTCGGGCTGGAGACCGTCGGCTTCCTGATGATGAGCCACACCATCCCGCCGGAAAAGCTCGCCCAGCAGGCCCGC ATCATGGCCGACGCCGGCTGCCAGTGCGTCTACGTGGTCGACTCGGCCGGCGCGCTGGTGCTCGAGGGCGTGCGCGACCG GGTGGCCGCGCTGGTCGCCGAGCTGGGCGACGACGCCCAGGTCGGTTTCCACGGGCACGAGAACCTCGGGCTCGGGGTGG CCAACAGCGTCGAGGCCGTCCGGGCCGGCGCCAAGCAGATCGACGGCTCGTGCCGCCGGTTCGGGGCCGGGGCGGGCAAC GCGCCCGTCGAGGCGCTGATCGGCGTGTTCGACAAGATCGGCGTCAAGACCGGCATCGACTTCTTCGACATCGCCGACGC CGCCGAGGAGGTGGTCGCGCCGGCCATGCCCGCCGAGTGCCTGCTCGACCGCAACGCCCTGATCATGGGCTATTCCGGGG TGTACTCGAGCTTCCTCAAGCACGCCATCCGCCAGTCCGAGCGCTACGGGGTGCCCGCACACCAGCTGCTGCACCGGGCC GGTCAGCGCAAACTCATCGGCGGTCAGGAAGACCAGCTGATCGACATCGCGCTGGAGATCAAGCGCGAGCAGGAAAGCGG TGCCGCGGCGGCGCGCTGA
Upstream 100 bases:
>100_bases CCCCGTACGCGGGCAACCTGGACATCATGACCGCCGCGGCCACCAAGGTCGGCGAGGAGATCGCCAAGGAGACGCTGGCC ACGACGGCGGGAGGAGCGCA
Downstream 100 bases:
>100_bases GCCGGGGCGCTTTCGCACAGCCGACGCAAAGCTTGCGCGGGTAACCTGGCGCGCATGAGCACATCCAACACAGTCGGCGC CCGTCGCCGCGGGCTGTACG
Product: 4-hydroxy-2-ketovalerate aldolase
Products: NA
Alternate protein names: HOA 1; 4-hydroxy-2-keto-pentanoic acid aldolase 1; 4-hydroxy-2-oxopentanoate aldolase 1 [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTTDIFFNPIWDVRLTDTSLRDGSHHKRHQFTKDEVQAIVAALDAAGVPVIEVTHGDGLGGSSFNYGFSKTPEQELIKLA AETAKDAKIAFLMLPGVGTKEDIKEAQNNGGSICRIATHCTEADVSIQHFGLARELGLETVGFLMMSHTIPPEKLAQQAR IMADAGCQCVYVVDSAGALVLEGVRDRVAALVAELGDDAQVGFHGHENLGLGVANSVEAVRAGAKQIDGSCRRFGAGAGN APVEALIGVFDKIGVKTGIDFFDIADAAEEVVAPAMPAECLLDRNALIMGYSGVYSSFLKHAIRQSERYGVPAHQLLHRA GQRKLIGGQEDQLIDIALEIKREQESGAAAAR
Sequences:
>Translated_352_residues MTTDIFFNPIWDVRLTDTSLRDGSHHKRHQFTKDEVQAIVAALDAAGVPVIEVTHGDGLGGSSFNYGFSKTPEQELIKLA AETAKDAKIAFLMLPGVGTKEDIKEAQNNGGSICRIATHCTEADVSIQHFGLARELGLETVGFLMMSHTIPPEKLAQQAR IMADAGCQCVYVVDSAGALVLEGVRDRVAALVAELGDDAQVGFHGHENLGLGVANSVEAVRAGAKQIDGSCRRFGAGAGN APVEALIGVFDKIGVKTGIDFFDIADAAEEVVAPAMPAECLLDRNALIMGYSGVYSSFLKHAIRQSERYGVPAHQLLHRA GQRKLIGGQEDQLIDIALEIKREQESGAAAAR >Mature_351_residues TTDIFFNPIWDVRLTDTSLRDGSHHKRHQFTKDEVQAIVAALDAAGVPVIEVTHGDGLGGSSFNYGFSKTPEQELIKLAA ETAKDAKIAFLMLPGVGTKEDIKEAQNNGGSICRIATHCTEADVSIQHFGLARELGLETVGFLMMSHTIPPEKLAQQARI MADAGCQCVYVVDSAGALVLEGVRDRVAALVAELGDDAQVGFHGHENLGLGVANSVEAVRAGAKQIDGSCRRFGAGAGNA PVEALIGVFDKIGVKTGIDFFDIADAAEEVVAPAMPAECLLDRNALIMGYSGVYSSFLKHAIRQSERYGVPAHQLLHRAG QRKLIGGQEDQLIDIALEIKREQESGAAAAR
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1786548, Length=330, Percent_Identity=50.9090909090909, Blast_Score=328, Evalue=2e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - ProDom: PD005364 [H]
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like [H]
EC number: =4.1.3.39 [H]
Molecular weight: Translated: 37499; Mature: 37368
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDIFFNPIWDVRLTDTSLRDGSHHKRHQFTKDEVQAIVAALDAAGVPVIEVTHGDGLG CCCCEEECCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC GSSFNYGFSKTPEQELIKLAAETAKDAKIAFLMLPGVGTKEDIKEAQNNGGSICRIATHC CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECC TEADVSIQHFGLARELGLETVGFLMMSHTIPPEKLAQQARIMADAGCQCVYVVDSAGALV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHH LEGVRDRVAALVAELGDDAQVGFHGHENLGLGVANSVEAVRAGAKQIDGSCRRFGAGAGN HHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCC APVEALIGVFDKIGVKTGIDFFDIADAAEEVVAPAMPAECLLDRNALIMGYSGVYSSFLK CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECHHHHHHHHH HAIRQSERYGVPAHQLLHRAGQRKLIGGQEDQLIDIALEIKREQESGAAAAR HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCC >Mature Secondary Structure TTDIFFNPIWDVRLTDTSLRDGSHHKRHQFTKDEVQAIVAALDAAGVPVIEVTHGDGLG CCCEEECCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC GSSFNYGFSKTPEQELIKLAAETAKDAKIAFLMLPGVGTKEDIKEAQNNGGSICRIATHC CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECC TEADVSIQHFGLARELGLETVGFLMMSHTIPPEKLAQQARIMADAGCQCVYVVDSAGALV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHH LEGVRDRVAALVAELGDDAQVGFHGHENLGLGVANSVEAVRAGAKQIDGSCRRFGAGAGN HHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCC APVEALIGVFDKIGVKTGIDFFDIADAAEEVVAPAMPAECLLDRNALIMGYSGVYSSFLK CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCEEEEECHHHHHHHHH HAIRQSERYGVPAHQLLHRAGQRKLIGGQEDQLIDIALEIKREQESGAAAAR HHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA