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The map label for this gene is fadE29

Identifier: 41406622

GI number: 41406622

Start: 550323

End: 551486

Strand: Direct

Name: fadE29

Synonym: MAP0524

Alternate gene names: 41406622

Gene position: 550323-551486 (Clockwise)

Preceding gene: 41406621

Following gene: 41406623

Centisome position: 11.39

GC content: 66.07

Gene sequence:

>1164_bases
ATGTTCATAGACCTGACCCCCGAACAGCGTCAGCTGCAAGCCGAACTGCGGGAATACTTTTCGAACCTGATCTCGTCCGA
CGAGATGAAGGCGATGGAGCAGGACCGCCACAACGAGGCCTACCGGGCGGTGATCCGGCGGATGGGCCGGGACGGCAAGC
TCGGGGTGGGCTGGCCAAAGGAGTTCGGCGGCTTGGGCTTCGGCCCGATCGAGCAGTCGATCTTCGTCAACGAGGCGCAT
CGCGCCGACGTGCCGCTGCCCGCGGTGACCCTGCAGACGGTCGGGCCGACGCTGCAACAGTTCGGCAGCGAGATGCAGAA
GAAGAAGTTCCTGCCGGCGATCCTGGCCGGCGAGGTGCACTTCGCGATCGGCTACACCGAGCCGGAGGCCGGCACCGACC
TGGCGTCGCTGCGCACCACGGCCGTGCGGCAGGGCGACGAGTACATCGTCAACGGGCAGAAGATCTTCACCACCGGTGCC
CATGACGCCGACTACATCTGGCTGGCCTGCCGCACCGATCCGGAAGCCGTGAAGCACAAGGGCATTTCGATCCTGATCGT
GGACACCAAGGACCCCGGCTACTCGTGGACGCCGATCATCCTGTCCGACGGCGCCCACCACACCAACGCCACCTACTACA
ACGACGTGCGGGTGCCCGCCGACATGCTGGTCGGCGAGGAGAACGGCGGGTGGAAGCTGATCACCACCCAGCTCAACAAC
GAGCGGGTGATGCTGGGCCCGGCCGGCCGTACCGCCGGCATCTACGACAGGGTGCGCGAATGGGCGTCCAAGCCGGGCAG
CGACGGGGTCACCCCGATCGACCACGCCGACGTCCAGCGGGCGCTCGGTGAGATCTATGCGATGTGGCGGATCAACGAGT
TGCTCAACTGGCAGGTGGCTGCGGCCGGTGAGGACATCAACGTCGCCGACGCCGCGTCGACGAAAGTCTTTGGCACCGAG
CGGATTCAGTACATCGGCCGGCTCGCCGAGGAAGTCGTCGGCAAGTACGGGAACCCCGCCGACCCGGAGACCGGCGAACT
GCTCAGGTGGCTGGACTCGCAAACCAAGCGCAACCTGGTGATCACGTTCGGCGGCGGTGTCAACGAAGTGATGCGCGAGA
TGATCGCCGCCGCCGGGCTCAAAGTGCCGAGGGTGCCCCGATGA

Upstream 100 bases:

>100_bases
TGCTGGGCGGGCCGTCGCATCGCCTGGACCTCGTGGCGATCGCAAGCGCGGCGCAGCCGGGCGCAGCGGGTCGGCACGCA
GACGACCTGGTGGGAGCGCA

Downstream 100 bases:

>100_bases
CCGACATCGCCGAAGCCATCGCGGAGATCAAAGCCGCCGGCGGGCCGAAACCGCGCGCCGGGCGCGACCCGGTGAATCAG
CCGATGATCAACAACTGGGT

Product: FadE29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPKEFGGLGFGPIEQSIFVNEAH
RADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVHFAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGA
HDADYIWLACRTDPEAVKHKGISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN
ERVMLGPAGRTAGIYDRVREWASKPGSDGVTPIDHADVQRALGEIYAMWRINELLNWQVAAAGEDINVADAASTKVFGTE
RIQYIGRLAEEVVGKYGNPADPETGELLRWLDSQTKRNLVITFGGGVNEVMREMIAAAGLKVPRVPR

Sequences:

>Translated_387_residues
MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPKEFGGLGFGPIEQSIFVNEAH
RADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVHFAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGA
HDADYIWLACRTDPEAVKHKGISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN
ERVMLGPAGRTAGIYDRVREWASKPGSDGVTPIDHADVQRALGEIYAMWRINELLNWQVAAAGEDINVADAASTKVFGTE
RIQYIGRLAEEVVGKYGNPADPETGELLRWLDSQTKRNLVITFGGGVNEVMREMIAAAGLKVPRVPR
>Mature_387_residues
MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPKEFGGLGFGPIEQSIFVNEAH
RADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVHFAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGA
HDADYIWLACRTDPEAVKHKGISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN
ERVMLGPAGRTAGIYDRVREWASKPGSDGVTPIDHADVQRALGEIYAMWRINELLNWQVAAAGEDINVADAASTKVFGTE
RIQYIGRLAEEVVGKYGNPADPETGELLRWLDSQTKRNLVITFGGGVNEVMREMIAAAGLKVPRVPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=386, Percent_Identity=27.4611398963731, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI226958414, Length=362, Percent_Identity=25.9668508287293, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=25.1968503937008, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI76496475, Length=348, Percent_Identity=27.5862068965517, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI7656849, Length=398, Percent_Identity=28.391959798995, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4557235, Length=348, Percent_Identity=27.5862068965517, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4557231, Length=363, Percent_Identity=26.7217630853994, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI187960098, Length=363, Percent_Identity=26.7217630853994, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI4557233, Length=319, Percent_Identity=26.0188087774295, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI21361497, Length=380, Percent_Identity=23.9473684210526, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4501859, Length=299, Percent_Identity=24.0802675585284, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=26.0416666666667, Blast_Score=100, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=383, Percent_Identity=26.3707571801567, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508101, Length=329, Percent_Identity=25.8358662613982, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=362, Percent_Identity=23.7569060773481, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=364, Percent_Identity=28.021978021978, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=341, Percent_Identity=26.9794721407625, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=363, Percent_Identity=24.2424242424242, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=297, Percent_Identity=25.5892255892256, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=330, Percent_Identity=26.3636363636364, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=368, Percent_Identity=25, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=311, Percent_Identity=25.4019292604502, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71982178, Length=282, Percent_Identity=25.531914893617, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71985184, Length=365, Percent_Identity=24.6575342465753, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=239, Percent_Identity=26.3598326359833, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281363737, Length=395, Percent_Identity=25.5696202531646, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=26.246719160105, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21356377, Length=306, Percent_Identity=27.7777777777778, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24646207, Length=349, Percent_Identity=27.2206303724928, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24660351, Length=307, Percent_Identity=27.3615635179153, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24666513, Length=217, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI19920834, Length=392, Percent_Identity=24.7448979591837, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42794; Mature: 42794

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPK
CEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCH
EFGGLGFGPIEQSIFVNEAHRADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVH
HHCCCCCCCCCHHHEECCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHCCHHHHCCCEE
FAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK
EEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCEEEEEECCCHHHHHHC
GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN
CCEEEEEECCCCCCEECEEEEECCCCCCCCEEEECCCCCHHHEEECCCCCEEEEEEEECC
ERVMLGPAGRTAGIYDRVREWASKPGSDGVTPIDHADVQRALGEIYAMWRINELLNWQVA
CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEE
AAGEDINVADAASTKVFGTERIQYIGRLAEEVVGKYGNPADPETGELLRWLDSQTKRNLV
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEE
ITFGGGVNEVMREMIAAAGLKVPRVPR
EEECCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFIDLTPEQRQLQAELREYFSNLISSDEMKAMEQDRHNEAYRAVIRRMGRDGKLGVGWPK
CEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCH
EFGGLGFGPIEQSIFVNEAHRADVPLPAVTLQTVGPTLQQFGSEMQKKKFLPAILAGEVH
HHCCCCCCCCCHHHEECCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHCCHHHHCCCEE
FAIGYTEPEAGTDLASLRTTAVRQGDEYIVNGQKIFTTGAHDADYIWLACRTDPEAVKHK
EEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCEEEEEECCCHHHHHHC
GISILIVDTKDPGYSWTPIILSDGAHHTNATYYNDVRVPADMLVGEENGGWKLITTQLNN
CCEEEEEECCCCCCEECEEEEECCCCCCCCEEEECCCCCHHHEEECCCCCEEEEEEEECC
ERVMLGPAGRTAGIYDRVREWASKPGSDGVTPIDHADVQRALGEIYAMWRINELLNWQVA
CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEE
AAGEDINVADAASTKVFGTERIQYIGRLAEEVVGKYGNPADPETGELLRWLDSQTKRNLV
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEE
ITFGGGVNEVMREMIAAAGLKVPRVPR
EEECCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]