| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406580
Identifier: 41406580
GI number: 41406580
Start: 509092
End: 510591
Strand: Direct
Name: 41406580
Synonym: MAP0482
Alternate gene names: NA
Gene position: 509092-510591 (Clockwise)
Preceding gene: 41406578
Following gene: 41406581
Centisome position: 10.54
GC content: 73.6
Gene sequence:
>1500_bases GTGATCGGCGGCGAGCTGCTGATTGGGCGCGACAGCGAATTGGCCGCCATTCGCCGCGCCCTGAACGGGGCTGACCACCA CCGCGGAGTGGTGATCGCCGGGGCCGCCGGCGTGGGCAAGACCTGGCTGGCCCGTGCGGCGCTGCGGCGCGCCGGGGCGT CGGGCGAGCAGATCAAATGGATCGTCGGCACCCAGTCCGCCCAGGCCCTGCCGCTCGGGGCGTTCATCGGCCTGCTCGGC GACGCGATGTCGGAGCCGCTCACCAGCGTGCGGCGGGTGATCGAGACGTTCGTGGCCCGGCAACGCCGGGGCCGGGTGGT GGTGGGCGTCGACGACGCGCACCTGCTGGACGGGTTGTCGGCCCTGGTGGTGCACCAGCTGGCGCAGTCCGGTGGGGTCC GGCTGGTGGTGACGGTGCGCACCGGCAGCCACCAGCCCGACGCCGTGACGGCGCTGTGGAAGGACGACCTGCTGACTCGC CTTGATCTGGAACCACTTTCGGCCGCGGCGACCCGCGAGGTGATCGAGAGCACGCTGGGTGGCCCGGTCGATGCGCGGTG CGCGGCGCGGTTCCGGCGGCTCACCGGGGGCAACACGCTGTTTTTGCGGCAGCTGCTGAGCGACCAGATGGCCGCCGGGC GGATGCGCCGCGTGGCCGGGGTGTGGATGTGGGACGGCGACGTCGCCGTCTCGGCCAGCCTGTCCGACACGGTGGGACGC CAGCTGGGCCGGCTCACCCCACCGCTGGCGCTGGTGGTGGACACATTGTCGCAGTGCGAGCCGCTGCCGGTAGACCTGTT GTGCGACTTGGCATCTCGAGAAGACCTGGTTGCGGCCGAGGCGATGGGACTGGTGACCGTCGAACGCACCCCGCGCGCCT TGATGGCCCGGCTCGCGCACCCGCTGTTCGGTGAGCTCCGCCGGGCCGGCGCCGGCGAGATGTACCTGTCGACGATCCGG GGCCGGCTGGCGACCCGGCTGGCGCAGGACCAAGACGCCGACATGCAGGCCACGGTGCGCCGGGCGTTGCTGACCCTGGA GTCCGACCTGGACCCGCAACCCGAGCTGTACCTGGAGTCGGCGCGGCACGCGATGACGCTGTTGGACCTGGACCTGGCCG ACCGGCTGGCCAACGCCGCCGCGCGGGCCGGGGCGCCCGGCGCCGCCGGGGTGCGGGCGATGAACCTGGTGCTGCTCGGC CGGGGCGAGCAGGCCGAGGAGGCGTTGCGGGCCATCACCGACGGCGCCGACGGCGACGCGTCCGATCGGCACTATTGGGC GACGGTGCGCGCGGCCAACCTGGTGTGGATGCTGGGCCGGCCGGCCGATGCCGCGCTGATCCTCGACGGCCTCGCCGCGC GGCCCGAGACCCCGGCGCAGGCCGCGGCGCGTTGCGCGGTGCAGGCCTGCCTGGACGCGGTGGCCGCGCGCTGTCAGCTC GCCGCCGAACGAGCCAGGGCCGATTGGATTCCGAGTCGCTGCCGGATTTCCATGCGATGA
Upstream 100 bases:
>100_bases ACTCCACCTCGGGTGGCCGCGCCGCCGCCGGTCCCGCGGCCGCGCTACCGAAGGCGGGCAATCCCGCCCGCGCGGCCCCC CGCACGGCTATGCTCGCCGC
Downstream 100 bases:
>100_bases TGGCGTCGCTGGCGCTGATCATGGCGATGGGGGCGCTGGGACAGGTCGACGACCTGACCGCGGTGGCCGAGCAGGCGCTG CGCCGCGCGACGACGTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein LuxR; Transcriptional Regulator LuxR Family; Regulatory Protein; Response Regulator Receiver Protein; Transcriptional Regulator; TPR Repeat-Containing Protein; Transcriptional Regulator LuxR Family Protein; LuxR Transcriptional Regulator; Luxr Family Transcriptional Regulator
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MIGGELLIGRDSELAAIRRALNGADHHRGVVIAGAAGVGKTWLARAALRRAGASGEQIKWIVGTQSAQALPLGAFIGLLG DAMSEPLTSVRRVIETFVARQRRGRVVVGVDDAHLLDGLSALVVHQLAQSGGVRLVVTVRTGSHQPDAVTALWKDDLLTR LDLEPLSAAATREVIESTLGGPVDARCAARFRRLTGGNTLFLRQLLSDQMAAGRMRRVAGVWMWDGDVAVSASLSDTVGR QLGRLTPPLALVVDTLSQCEPLPVDLLCDLASREDLVAAEAMGLVTVERTPRALMARLAHPLFGELRRAGAGEMYLSTIR GRLATRLAQDQDADMQATVRRALLTLESDLDPQPELYLESARHAMTLLDLDLADRLANAAARAGAPGAAGVRAMNLVLLG RGEQAEEALRAITDGADGDASDRHYWATVRAANLVWMLGRPADAALILDGLAARPETPAQAAARCAVQACLDAVAARCQL AAERARADWIPSRCRISMR
Sequences:
>Translated_499_residues MIGGELLIGRDSELAAIRRALNGADHHRGVVIAGAAGVGKTWLARAALRRAGASGEQIKWIVGTQSAQALPLGAFIGLLG DAMSEPLTSVRRVIETFVARQRRGRVVVGVDDAHLLDGLSALVVHQLAQSGGVRLVVTVRTGSHQPDAVTALWKDDLLTR LDLEPLSAAATREVIESTLGGPVDARCAARFRRLTGGNTLFLRQLLSDQMAAGRMRRVAGVWMWDGDVAVSASLSDTVGR QLGRLTPPLALVVDTLSQCEPLPVDLLCDLASREDLVAAEAMGLVTVERTPRALMARLAHPLFGELRRAGAGEMYLSTIR GRLATRLAQDQDADMQATVRRALLTLESDLDPQPELYLESARHAMTLLDLDLADRLANAAARAGAPGAAGVRAMNLVLLG RGEQAEEALRAITDGADGDASDRHYWATVRAANLVWMLGRPADAALILDGLAARPETPAQAAARCAVQACLDAVAARCQL AAERARADWIPSRCRISMR >Mature_499_residues MIGGELLIGRDSELAAIRRALNGADHHRGVVIAGAAGVGKTWLARAALRRAGASGEQIKWIVGTQSAQALPLGAFIGLLG DAMSEPLTSVRRVIETFVARQRRGRVVVGVDDAHLLDGLSALVVHQLAQSGGVRLVVTVRTGSHQPDAVTALWKDDLLTR LDLEPLSAAATREVIESTLGGPVDARCAARFRRLTGGNTLFLRQLLSDQMAAGRMRRVAGVWMWDGDVAVSASLSDTVGR QLGRLTPPLALVVDTLSQCEPLPVDLLCDLASREDLVAAEAMGLVTVERTPRALMARLAHPLFGELRRAGAGEMYLSTIR GRLATRLAQDQDADMQATVRRALLTLESDLDPQPELYLESARHAMTLLDLDLADRLANAAARAGAPGAAGVRAMNLVLLG RGEQAEEALRAITDGADGDASDRHYWATVRAANLVWMLGRPADAALILDGLAARPETPAQAAARCAVQACLDAVAARCQL AAERARADWIPSRCRISMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53137; Mature: 53137
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGELLIGRDSELAAIRRALNGADHHRGVVIAGAAGVGKTWLARAALRRAGASGEQIKW CCCCCEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEE IVGTQSAQALPLGAFIGLLGDAMSEPLTSVRRVIETFVARQRRGRVVVGVDDAHLLDGLS EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH ALVVHQLAQSGGVRLVVTVRTGSHQPDAVTALWKDDLLTRLDLEPLSAAATREVIESTLG HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GPVDARCAARFRRLTGGNTLFLRQLLSDQMAAGRMRRVAGVWMWDGDVAVSASLSDTVGR CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHH QLGRLTPPLALVVDTLSQCEPLPVDLLCDLASREDLVAAEAMGLVTVERTPRALMARLAH HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCEEEECCCHHHHHHHHHH PLFGELRRAGAGEMYLSTIRGRLATRLAQDQDADMQATVRRALLTLESDLDPQPELYLES HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH ARHAMTLLDLDLADRLANAAARAGAPGAAGVRAMNLVLLGRGEQAEEALRAITDGADGDA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHCCCCCCC SDRHYWATVRAANLVWMLGRPADAALILDGLAARPETPAQAAARCAVQACLDAVAARCQL CCCEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAERARADWIPSRCRISMR HHHHHHHCCCCCCCEECCC >Mature Secondary Structure MIGGELLIGRDSELAAIRRALNGADHHRGVVIAGAAGVGKTWLARAALRRAGASGEQIKW CCCCCEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEE IVGTQSAQALPLGAFIGLLGDAMSEPLTSVRRVIETFVARQRRGRVVVGVDDAHLLDGLS EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH ALVVHQLAQSGGVRLVVTVRTGSHQPDAVTALWKDDLLTRLDLEPLSAAATREVIESTLG HHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GPVDARCAARFRRLTGGNTLFLRQLLSDQMAAGRMRRVAGVWMWDGDVAVSASLSDTVGR CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHH QLGRLTPPLALVVDTLSQCEPLPVDLLCDLASREDLVAAEAMGLVTVERTPRALMARLAH HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCEEEECCCHHHHHHHHHH PLFGELRRAGAGEMYLSTIRGRLATRLAQDQDADMQATVRRALLTLESDLDPQPELYLES HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH ARHAMTLLDLDLADRLANAAARAGAPGAAGVRAMNLVLLGRGEQAEEALRAITDGADGDA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHCCCCCCC SDRHYWATVRAANLVWMLGRPADAALILDGLAARPETPAQAAARCAVQACLDAVAARCQL CCCEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAERARADWIPSRCRISMR HHHHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA