| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406545
Identifier: 41406545
GI number: 41406545
Start: 475191
End: 475604
Strand: Direct
Name: 41406545
Synonym: MAP0447
Alternate gene names: NA
Gene position: 475191-475604 (Clockwise)
Preceding gene: 41406540
Following gene: 41406546
Centisome position: 9.84
GC content: 67.87
Gene sequence:
>414_bases ATGCGCCTGGACCATGTCGTGCTGTGGACCAGAAATCCGCGGGTGTCGATGGACTTCTACACGCGCGTCGTCGGGCTGGA ACCGGTTCGGTTCGCCGAATTCGAGGCCGGCGAGGCGCCGTTCCCCAGCGTGCGCATCTGCGCGGACTCGATCATCGACT TGATGCCGCTCGAGATGGTTTCCGGCGCCGCGTCGTCCGGGGTCGCCGAGGGCAGCGCCGGTAACCCCGTCAACCACGTC TGTATTGCCTTGTCCAAGGCCGAATACGACGCGCTGGAGGCGCGCCTGCAGGCCGAGGGCGTGGACACCGGCGTGCGCCT GAGCCGGAGTTTCGGCGCGCGGGGCTGGTCGCCGCACACCTACTACTTCGCCGACCCGGACGGCAACGTCGTCGAGGCCC GCTACTACGAGTGA
Upstream 100 bases:
>100_bases CTCACCAAAGCACAACGGTCGCGGACAGAGAAGGGCCCAATTGACGCGAATGGCGGTGGGTTGCGCATCAAATGGCCGCA ACACCGCAATACTCGGGTTT
Downstream 100 bases:
>100_bases CGGGCCCGGCCGCAGCGCCGAGCGTCACGCAGGAGTGACACCGGCCGCCGACGGCAGCGCCAGCGTGACGCTCGGGAACC GCCGGTCGTTGCTATTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Glyoxalase; Ring-Cleaving Dioxygenase; Glyoxalase Family Protein
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MRLDHVVLWTRNPRVSMDFYTRVVGLEPVRFAEFEAGEAPFPSVRICADSIIDLMPLEMVSGAASSGVAEGSAGNPVNHV CIALSKAEYDALEARLQAEGVDTGVRLSRSFGARGWSPHTYYFADPDGNVVEARYYE
Sequences:
>Translated_137_residues MRLDHVVLWTRNPRVSMDFYTRVVGLEPVRFAEFEAGEAPFPSVRICADSIIDLMPLEMVSGAASSGVAEGSAGNPVNHV CIALSKAEYDALEARLQAEGVDTGVRLSRSFGARGWSPHTYYFADPDGNVVEARYYE >Mature_137_residues MRLDHVVLWTRNPRVSMDFYTRVVGLEPVRFAEFEAGEAPFPSVRICADSIIDLMPLEMVSGAASSGVAEGSAGNPVNHV CIALSKAEYDALEARLQAEGVDTGVRLSRSFGARGWSPHTYYFADPDGNVVEARYYE
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15029; Mature: 15029
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDHVVLWTRNPRVSMDFYTRVVGLEPVRFAEFEAGEAPFPSVRICADSIIDLMPLEMV CCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH SGAASSGVAEGSAGNPVNHVCIALSKAEYDALEARLQAEGVDTGVRLSRSFGARGWSPHT CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCE YYFADPDGNVVEARYYE EEEECCCCCEEEEEECC >Mature Secondary Structure MRLDHVVLWTRNPRVSMDFYTRVVGLEPVRFAEFEAGEAPFPSVRICADSIIDLMPLEMV CCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH SGAASSGVAEGSAGNPVNHVCIALSKAEYDALEARLQAEGVDTGVRLSRSFGARGWSPHT CCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCE YYFADPDGNVVEARYYE EEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA