| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406522
Identifier: 41406522
GI number: 41406522
Start: 448638
End: 449228
Strand: Direct
Name: 41406522
Synonym: MAP0424
Alternate gene names: NA
Gene position: 448638-449228 (Clockwise)
Preceding gene: 41406521
Following gene: 41406523
Centisome position: 9.29
GC content: 75.47
Gene sequence:
>591_bases GTGAGCCAGCTTTCCTTCTTCACGGCGGAGTCGGTGCCCCCCGCGGTCGCCGATCTCTCCGGGGTGCTGGCGGCGTCCGG GCAGATCGTCATGGTCGGGACCCCGGAACCCCACGGCGCCCGGCTGTCGGTGGTGGTCGACCACACCTGGCGCGCCGAGG CGCTGGCGGACATGATCTCCGAGGCCGGCCTGGTGGCCGAGATCGGCCGGACCGACGAGGACACCCCGCTGGTGCGCACC GCGGTGGACCCCGCGCTGAGCCCGCTGGCCGCCGAATGGACGCGCGGCGCCGTGAAGACCGTCCCGCCGCGCTGGCTGCC CGGGCCGCGCGAGCTGCGGGCCTGGACGCTGGCCGCCGGCAACCCCGAGGGCGAGCACTATGTGCTGGCGCTGGATCCGC ACGCACCCGACACTCACTCGCCGCTGGCGTCGGCGTTGATGCGGGTCGGCATCGCGCCCACGCTGATCGGCACCCGCGGC GGGCGGCCAGCGCTGCGGATCAGCGGCCGCCGCCGGCTGTCACGCCTGGTAGAGAACGTGGGAGAGCCGCCCGACAGCCC GGAGGCGTCGGCGCACTGGCCGCGCGTGTAG
Upstream 100 bases:
>100_bases GGGTTTCATCCCTGGTGATCTCCCGCGGCCCGAGTCGGCGCGCCCGCAACGCCGATTGCCTCAAGACGCGAACGGTAGAC CTGGCCTACTGTCGGATGGC
Downstream 100 bases:
>100_bases CGGGCGGACGGACCCCGGATCCGGCCCGCCGCCGGGCCCGCCGGTTTGCGCAGGCGAGCCTCCGGGTGCGAAATTGTCAG GTGCCGCAGGGCGAAGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSQLSFFTAESVPPAVADLSGVLAASGQIVMVGTPEPHGARLSVVVDHTWRAEALADMISEAGLVAEIGRTDEDTPLVRT AVDPALSPLAAEWTRGAVKTVPPRWLPGPRELRAWTLAAGNPEGEHYVLALDPHAPDTHSPLASALMRVGIAPTLIGTRG GRPALRISGRRRLSRLVENVGEPPDSPEASAHWPRV
Sequences:
>Translated_196_residues MSQLSFFTAESVPPAVADLSGVLAASGQIVMVGTPEPHGARLSVVVDHTWRAEALADMISEAGLVAEIGRTDEDTPLVRT AVDPALSPLAAEWTRGAVKTVPPRWLPGPRELRAWTLAAGNPEGEHYVLALDPHAPDTHSPLASALMRVGIAPTLIGTRG GRPALRISGRRRLSRLVENVGEPPDSPEASAHWPRV >Mature_195_residues SQLSFFTAESVPPAVADLSGVLAASGQIVMVGTPEPHGARLSVVVDHTWRAEALADMISEAGLVAEIGRTDEDTPLVRTA VDPALSPLAAEWTRGAVKTVPPRWLPGPRELRAWTLAAGNPEGEHYVLALDPHAPDTHSPLASALMRVGIAPTLIGTRGG RPALRISGRRRLSRLVENVGEPPDSPEASAHWPRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20767; Mature: 20636
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLSFFTAESVPPAVADLSGVLAASGQIVMVGTPEPHGARLSVVVDHTWRAEALADMIS CCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHH EAGLVAEIGRTDEDTPLVRTAVDPALSPLAAEWTRGAVKTVPPRWLPGPRELRAWTLAAG HCCCEEECCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECC NPEGEHYVLALDPHAPDTHSPLASALMRVGIAPTLIGTRGGRPALRISGRRRLSRLVENV CCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECHHHHHHHHHHHH GEPPDSPEASAHWPRV CCCCCCCCCCCCCCCC >Mature Secondary Structure SQLSFFTAESVPPAVADLSGVLAASGQIVMVGTPEPHGARLSVVVDHTWRAEALADMIS CCCCCEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHH EAGLVAEIGRTDEDTPLVRTAVDPALSPLAAEWTRGAVKTVPPRWLPGPRELRAWTLAAG HCCCEEECCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEEEECC NPEGEHYVLALDPHAPDTHSPLASALMRVGIAPTLIGTRGGRPALRISGRRRLSRLVENV CCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECHHHHHHHHHHHH GEPPDSPEASAHWPRV CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA