| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406428
Identifier: 41406428
GI number: 41406428
Start: 353051
End: 354379
Strand: Direct
Name: 41406428
Synonym: MAP0330
Alternate gene names: NA
Gene position: 353051-354379 (Clockwise)
Preceding gene: 41406426
Following gene: 41406429
Centisome position: 7.31
GC content: 72.16
Gene sequence:
>1329_bases ATGAGCGCCGAACCGCAGCCGCCGACCGTGCCGGCGGGCGCGGCGGCGGGGCACCCCCGCCGGTCGGTGATCGAGGCGGC GTGGCGGGCGATCGGGCCCGGCGTGGAGGTGCTCAGCGCCGACGACGGCGGCCCGTTGAGCCGCACCATCAAACGCATCA TCGACCCGTTGGTGTTGCGGCTGCGGTCCAACCCGGCGTATTCGGCCCCGGTCGTCACGCCCGAGACGGCCGCGGCCATG CACGAGCTGATCGTCGGCAGCGGGCCCGAATTACGCGCTGCCGCAGCATGGTTCGAGGCGCTCAAGCTGGAACGACGCCG ACAGCGGATCCGCACCGGCAACGCGCAGGAATTCTACTTCCCGGTCTGCTTCGAACTGGCGGTGACCAAGGGCGCGCCGG CGCCGCACGATAACGAGACGGCGGCCGCCGTGCTCGCCGGCATCCACCGGGATCGCGATCGCACCGCGATCGAGGTTCTG CACCGATACGCCGGCAACCCCGATGTCGTTGCCGCGCTGGCCGATCAGCTGCAGCGCAGCTGGCGCGACGTGCGAGCCGG GCCCGCCGACACCGGCCCGTTTCTGGCCGAGCTCGCCACCGTGCTGGGGATGGCCGGAGGCCATCGCGGCGCGGCGGCCC GCCAACGCGTCTGGTCGGCGATGATCACCGACGCCACTCCCTACAATCTCGGGGCGCTGGCCCACATCGATTGCGCCTCG CTGCCCTGGTCCATCGTCGAGGTTGGGTTGAGTTCCGTTGAGCCGCAACGTGTCCCAGAGGTCGCGGCGGCCTCCGAGGG GGAGCGCCCGCTGGATCGCAACGTGCTGGACCGGGTGCGCGCCACCCTGCGGCGCGCCCTGGACCGCGACGCGCTGCCCG ACATCCCGTTGCTGTGCGAGGAGGAGGTCGACCGGGCGTGCGCGCCCTGGGGATTGCTGGCCGAGGACAAGCAGGCCGCG CTGGTGGCCGGCATCGAGGTCGCCATGCAGCTGGCCCCGCTGGACCCGTCGGCCTGCTGCCGCGACGACCTGGCGGCGCA GATCCAGGCGCGGCTGCGCAAGGAAGCCTACGTCTTGCACGCCCGACGCTATCTTGCTGACAACGGCCCGATCCATCCCC GCCAGCAGCAGGTGGTCGACGACCTCGCCGCGTTCGCGCAGCCCTACCTGAGTCGGCTGTGGGCGCGGCTGCACGGGCGC GACGTGTGGCAGGAGCCCTGCGACGACGTCGACGACGTGCGGGCGCTGCTCGACGGGGTGGCCCGCTCGGTGAGCCTCGA CCACCGGCAGCGGATCAAGGCGATGCTGGAATTGCAGGTGGCCGGATGA
Upstream 100 bases:
>100_bases CGCAGCAGTGTGTTCATCCGCTCAGGGTGACGCGGCCGATCGGCTACCGAACCCAACTTCGCGGCTGCCGCAACCGTTGC GCCGGCCCTATTCTGTGCTG
Downstream 100 bases:
>100_bases GATTGGTTGCCGATTCCGGGCTTTGGACCACCGGCCGGGCAGACGTCACCGAGGAGCCGCCGCTGGTGGCCCTGCTGGAG GTCAGCGGCGCGGTGCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSAEPQPPTVPAGAAAGHPRRSVIEAAWRAIGPGVEVLSADDGGPLSRTIKRIIDPLVLRLRSNPAYSAPVVTPETAAAM HELIVGSGPELRAAAAWFEALKLERRRQRIRTGNAQEFYFPVCFELAVTKGAPAPHDNETAAAVLAGIHRDRDRTAIEVL HRYAGNPDVVAALADQLQRSWRDVRAGPADTGPFLAELATVLGMAGGHRGAAARQRVWSAMITDATPYNLGALAHIDCAS LPWSIVEVGLSSVEPQRVPEVAAASEGERPLDRNVLDRVRATLRRALDRDALPDIPLLCEEEVDRACAPWGLLAEDKQAA LVAGIEVAMQLAPLDPSACCRDDLAAQIQARLRKEAYVLHARRYLADNGPIHPRQQQVVDDLAAFAQPYLSRLWARLHGR DVWQEPCDDVDDVRALLDGVARSVSLDHRQRIKAMLELQVAG
Sequences:
>Translated_442_residues MSAEPQPPTVPAGAAAGHPRRSVIEAAWRAIGPGVEVLSADDGGPLSRTIKRIIDPLVLRLRSNPAYSAPVVTPETAAAM HELIVGSGPELRAAAAWFEALKLERRRQRIRTGNAQEFYFPVCFELAVTKGAPAPHDNETAAAVLAGIHRDRDRTAIEVL HRYAGNPDVVAALADQLQRSWRDVRAGPADTGPFLAELATVLGMAGGHRGAAARQRVWSAMITDATPYNLGALAHIDCAS LPWSIVEVGLSSVEPQRVPEVAAASEGERPLDRNVLDRVRATLRRALDRDALPDIPLLCEEEVDRACAPWGLLAEDKQAA LVAGIEVAMQLAPLDPSACCRDDLAAQIQARLRKEAYVLHARRYLADNGPIHPRQQQVVDDLAAFAQPYLSRLWARLHGR DVWQEPCDDVDDVRALLDGVARSVSLDHRQRIKAMLELQVAG >Mature_441_residues SAEPQPPTVPAGAAAGHPRRSVIEAAWRAIGPGVEVLSADDGGPLSRTIKRIIDPLVLRLRSNPAYSAPVVTPETAAAMH ELIVGSGPELRAAAAWFEALKLERRRQRIRTGNAQEFYFPVCFELAVTKGAPAPHDNETAAAVLAGIHRDRDRTAIEVLH RYAGNPDVVAALADQLQRSWRDVRAGPADTGPFLAELATVLGMAGGHRGAAARQRVWSAMITDATPYNLGALAHIDCASL PWSIVEVGLSSVEPQRVPEVAAASEGERPLDRNVLDRVRATLRRALDRDALPDIPLLCEEEVDRACAPWGLLAEDKQAAL VAGIEVAMQLAPLDPSACCRDDLAAQIQARLRKEAYVLHARRYLADNGPIHPRQQQVVDDLAAFAQPYLSRLWARLHGRD VWQEPCDDVDDVRALLDGVARSVSLDHRQRIKAMLELQVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47981; Mature: 47850
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEPQPPTVPAGAAAGHPRRSVIEAAWRAIGPGVEVLSADDGGPLSRTIKRIIDPLVLR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH LRSNPAYSAPVVTPETAAAMHELIVGSGPELRAAAAWFEALKLERRRQRIRTGNAQEFYF HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH PVCFELAVTKGAPAPHDNETAAAVLAGIHRDRDRTAIEVLHRYAGNPDVVAALADQLQRS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH WRDVRAGPADTGPFLAELATVLGMAGGHRGAAARQRVWSAMITDATPYNLGALAHIDCAS HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCHHH LPWSIVEVGLSSVEPQRVPEVAAASEGERPLDRNVLDRVRATLRRALDRDALPDIPLLCE CCHHHHHHHHHCCCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH EEVDRACAPWGLLAEDKQAALVAGIEVAMQLAPLDPSACCRDDLAAQIQARLRKEAYVLH HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ARRYLADNGPIHPRQQQVVDDLAAFAQPYLSRLWARLHGRDVWQEPCDDVDDVRALLDGV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH ARSVSLDHRQRIKAMLELQVAG HHHHCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAEPQPPTVPAGAAAGHPRRSVIEAAWRAIGPGVEVLSADDGGPLSRTIKRIIDPLVLR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH LRSNPAYSAPVVTPETAAAMHELIVGSGPELRAAAAWFEALKLERRRQRIRTGNAQEFYF HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH PVCFELAVTKGAPAPHDNETAAAVLAGIHRDRDRTAIEVLHRYAGNPDVVAALADQLQRS HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH WRDVRAGPADTGPFLAELATVLGMAGGHRGAAARQRVWSAMITDATPYNLGALAHIDCAS HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCHHH LPWSIVEVGLSSVEPQRVPEVAAASEGERPLDRNVLDRVRATLRRALDRDALPDIPLLCE CCHHHHHHHHHCCCHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH EEVDRACAPWGLLAEDKQAALVAGIEVAMQLAPLDPSACCRDDLAAQIQARLRKEAYVLH HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ARRYLADNGPIHPRQQQVVDDLAAFAQPYLSRLWARLHGRDVWQEPCDDVDDVRALLDGV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH ARSVSLDHRQRIKAMLELQVAG HHHHCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA