| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406422
Identifier: 41406422
GI number: 41406422
Start: 347661
End: 348494
Strand: Direct
Name: 41406422
Synonym: MAP0324
Alternate gene names: NA
Gene position: 347661-348494 (Clockwise)
Preceding gene: 41406419
Following gene: 41406424
Centisome position: 7.2
GC content: 69.66
Gene sequence:
>834_bases ATGGGGCGCAAGGTCGCCATCCCGTGGCACGCGTCATTTTCGATCGCTGCCGGCGTCCTCTACTTCTTCTTCGTGTTGCC CCGCTGGCCCGAGCTGATGGGTGACACGACACATTCGCTGGGGACGGCGCTGCGGATCGTGGCGGGTGTGCTGGTCGCGC TGGCGGCGCTGCCGGTGGTGTTCACCCTGTTGCGCACCCGCAAGCCCGAGCTGGGCACGCCGCAGCTGGCGTTGTCGCTG CGGGTCGCCTCGATCGTGGCGCACGTGCTGGCCGGGTTGTTGATCATCGGGACGGCGGTCAGCGAGATCTGGCTGAGCCT GGATGCCGCCGGCCGGTGGTTGTTCGGGATTTACGGCGCGGCCGCCGCGATCGCGCTGCTCGGCATTTTCGCGTTCTACC TCTCGTTCGTCGCGGAACTGCCACCGCCGCCGCCCAAACCGATCAAGGCCAAGAAGCCCAAGAAGCGCCGGCTGCGTCGC AAGAAGGCCGGCGAAGAGGCGGAGACGGCCGAAACGGCTGAAGCGGAAGAGGCCGAGGCGGAAGAGGCCGACGAGACCGA AGCGGCGCAGACCGTCACGGCCGAAACCGAAGCAGCCGAAGAGGCCGGGGAAACCGAAGCAGCCGAAGACACCGCCGAGG CCGAGAAACCCGCCGCAACCGAGCCCGAAGCCGAGACGCCCGTGGCCGAGGACAGCGACGAATCGCGGGCCAAGCTCCGC AACCGCCGCCCGACGGGCAAGGGCACGCACCGGATGCGGCGCCGGCGCACCCGGGCCGGCGTCGCGGTCGACCAAACCGC CGAGCAGTCCGGCGACGACGCCGACGAGAACTAG
Upstream 100 bases:
>100_bases TAGCCCTCGCGGGTTCAAATCCCGCATCCTCCGCCATTGGTCCGCCCAGCGGACGCGCACAACGTGGGCCGGCTCCAGCC GGTCTTGCATGAGGAGGCTT
Downstream 100 bases:
>100_bases CGCGCCACCGCCAGCAGCACCGGAATCGGCGTGTTCTCGTCGGTGTGATAACTCGCGCACACCCGGTGATAGCCGTCGGC GATCTGCAACGGGACACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVVFTLLRTRKPELGTPQLALSL RVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGAAAAIALLGIFAFYLSFVAELPPPPPKPIKAKKPKKRRLRR KKAGEEAETAETAEAEEAEAEEADETEAAQTVTAETEAAEEAGETEAAEDTAEAEKPAATEPEAETPVAEDSDESRAKLR NRRPTGKGTHRMRRRRTRAGVAVDQTAEQSGDDADEN
Sequences:
>Translated_277_residues MGRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVVFTLLRTRKPELGTPQLALSL RVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGAAAAIALLGIFAFYLSFVAELPPPPPKPIKAKKPKKRRLRR KKAGEEAETAETAEAEEAEAEEADETEAAQTVTAETEAAEEAGETEAAEDTAEAEKPAATEPEAETPVAEDSDESRAKLR NRRPTGKGTHRMRRRRTRAGVAVDQTAEQSGDDADEN >Mature_276_residues GRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVVFTLLRTRKPELGTPQLALSLR VASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGAAAAIALLGIFAFYLSFVAELPPPPPKPIKAKKPKKRRLRRK KAGEEAETAETAEAEEAEAEEADETEAAQTVTAETEAAEEAGETEAAEDTAEAEKPAATEPEAETPVAEDSDESRAKLRN RRPTGKGTHRMRRRRTRAGVAVDQTAEQSGDDADEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29745; Mature: 29614
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVV CCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FTLLRTRKPELGTPQLALSLRVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAIALLGIFAFYLSFVAELPPPPPKPIKAKKPKKRRLRRKKAGEEAETAETAEAEEAEA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EEADETEAAQTVTAETEAAEEAGETEAAEDTAEAEKPAATEPEAETPVAEDSDESRAKLR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH NRRPTGKGTHRMRRRRTRAGVAVDQTAEQSGDDADEN HCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure GRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVV CCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FTLLRTRKPELGTPQLALSLRVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAIALLGIFAFYLSFVAELPPPPPKPIKAKKPKKRRLRRKKAGEEAETAETAEAEEAEA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EEADETEAAQTVTAETEAAEEAGETEAAEDTAEAEKPAATEPEAETPVAEDSDESRAKLR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH NRRPTGKGTHRMRRRRTRAGVAVDQTAEQSGDDADEN HCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA