Click here to switch to the map view.

The map label for this gene is cobQ2

Identifier: 41406413

GI number: 41406413

Start: 338146

End: 338823

Strand: Direct

Name: cobQ2

Synonym: MAP0315

Alternate gene names: 41406413

Gene position: 338146-338823 (Clockwise)

Preceding gene: 41406412

Following gene: 41406416

Centisome position: 7.0

GC content: 72.71

Gene sequence:

>678_bases
GTGCTGCCCGACGTGATGGGCACCTACGGCGACGGCGGCAACGCGCTGGTGCTGCGACAGCGACTGCGGCTGCGCGGCAT
CGACGCCGAGATCGTTGAGCTCACGCTGGCCGACCCGGTGCCCGAGTCGTTGGACCTCTACACGCTGGGCGGGGCCGAGG
ACTACGCGCAGCGGCTCGCCACCCGGCACCTGCTGCGCTACCCGGGCCTGCAGCGCGCCGCCGAACGCGGCGCGCCGGTG
CTGGCGATCTGCGCGGCCGTTCAGGTGCTCGGGCACTGGTATGAGACGTCGGCCGGGGAACGGGTCGACGGCGTGGGCAT
GCTGGACGCGACGACCTCCCCGCAGGACGCCCGCCACATCGGCGAGCTGGTGACCAAGCCGCTGCTGGCCGGCTTGACCG
AGCCGTTGACCGGTTTCGAAAACCACAGGGGCGGAACGGTATTGGGCCCCTCCGCCGCTCCCCTGGGCGCGGTAGTCAAG
GGTGCGGGCAACCGCGCCGGAGACGGTTTCGACGGGGTAGTGCAGGGGTCGGTGGTCGCCACCTACATGCACGGGCCGTG
CCTGGCCCGCAACCCGCAGCTGGCCGACCTGCTGCTGCGCAAGGTGGTCGGCGGGCTGCCCGAGCTGCCAATGCCCGAGG
TGGAGTTGCTGCGCCGGGAGCGGCTGGCCGCCCGCTGA

Upstream 100 bases:

>100_bases
CCGCCCGGGCGGGTGGAGGTCGTCGCCAACTACACCGCGTTCCTGGCGCTGCAACGAGCGGTGGCGCGCCATGGCTGATT
CGGTCGTGCGGATCGGGCTG

Downstream 100 bases:

>100_bases
GCGGCCGAAAACCCTCAGACCATGGCGCGGCGGCCGGCCAGCGCGCGGCCCAGCGTCAACTCGTCGGCGAACTCCAGATC
GCCGCCCATCGGCAGCCCGG

Product: CobQ2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLPDVMGTYGDGGNALVLRQRLRLRGIDAEIVELTLADPVPESLDLYTLGGAEDYAQRLATRHLLRYPGLQRAAERGAPV
LAICAAVQVLGHWYETSAGERVDGVGMLDATTSPQDARHIGELVTKPLLAGLTEPLTGFENHRGGTVLGPSAAPLGAVVK
GAGNRAGDGFDGVVQGSVVATYMHGPCLARNPQLADLLLRKVVGGLPELPMPEVELLRRERLAAR

Sequences:

>Translated_225_residues
MLPDVMGTYGDGGNALVLRQRLRLRGIDAEIVELTLADPVPESLDLYTLGGAEDYAQRLATRHLLRYPGLQRAAERGAPV
LAICAAVQVLGHWYETSAGERVDGVGMLDATTSPQDARHIGELVTKPLLAGLTEPLTGFENHRGGTVLGPSAAPLGAVVK
GAGNRAGDGFDGVVQGSVVATYMHGPCLARNPQLADLLLRKVVGGLPELPMPEVELLRRERLAAR
>Mature_225_residues
MLPDVMGTYGDGGNALVLRQRLRLRGIDAEIVELTLADPVPESLDLYTLGGAEDYAQRLATRHLLRYPGLQRAAERGAPV
LAICAAVQVLGHWYETSAGERVDGVGMLDATTSPQDARHIGELVTKPLLAGLTEPLTGFENHRGGTVLGPSAAPLGAVVK
GAGNRAGDGFDGVVQGSVVATYMHGPCLARNPQLADLLLRKVVGGLPELPMPEVELLRRERLAAR

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG3442

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 23811; Mature: 23811

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDVMGTYGDGGNALVLRQRLRLRGIDAEIVELTLADPVPESLDLYTLGGAEDYAQRLA
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCEEEECCHHHHHHHHH
TRHLLRYPGLQRAAERGAPVLAICAAVQVLGHWYETSAGERVDGVGMLDATTSPQDARHI
HHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHH
GELVTKPLLAGLTEPLTGFENHRGGTVLGPSAAPLGAVVKGAGNRAGDGFDGVVQGSVVA
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCHHCCCEEE
TYMHGPCLARNPQLADLLLRKVVGGLPELPMPEVELLRRERLAAR
EECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLPDVMGTYGDGGNALVLRQRLRLRGIDAEIVELTLADPVPESLDLYTLGGAEDYAQRLA
CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCEEEECCHHHHHHHHH
TRHLLRYPGLQRAAERGAPVLAICAAVQVLGHWYETSAGERVDGVGMLDATTSPQDARHI
HHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHH
GELVTKPLLAGLTEPLTGFENHRGGTVLGPSAAPLGAVVKGAGNRAGDGFDGVVQGSVVA
HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCHHCCCEEE
TYMHGPCLARNPQLADLLLRKVVGGLPELPMPEVELLRRERLAAR
EECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]