| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fadE36
Identifier: 41406368
GI number: 41406368
Start: 289434
End: 290486
Strand: Direct
Name: fadE36
Synonym: MAP0270
Alternate gene names: NA
Gene position: 289434-290486 (Clockwise)
Preceding gene: 41406367
Following gene: 41406369
Centisome position: 5.99
GC content: 68.95
Gene sequence:
>1053_bases GTGACCTCAGCTGACCAACTCGAAGGGCTCGACCTGGCGGCGCTGGATTCCTACCTGCGTTCGCTCGGCATCGGCCGCGA CGGCGAGTTGCGCGCGGAGTTCATCTCCGGCGGCCGTTCCAACCTGACGTTCCGGGTGTACGACGACGCCACCAGCTGGT TGGTGCGGCGCCCGCCGCTGCACGGGTTGACGCCGTCGGCGCACGACATGGCCCGCGAATACCGGGTGGTGGCCGCGCTG CAGGACACACCGGTTCCGGTGGCCCGCACGATCGGGTTGTGCGAGGACGAGTCGGTGCTGGGCGCGCCGTTCCAGATCGT CGAATTCGTTGCCGGCCAGGTGGTGCGCCGCCGCGCCCAGCTCGAGTCGTTCAGCCACACCGTGATCGAAGGCTGCGTCG ACTCGCTGATCCGGGTGCTGGTCGATCTGCACAGCGTCGATCCGGACGCCGTGGGCCTGGCCGACTTCGGCAAGCCCAGC GGTTATCTCGAGCGTCAGGTGCGCCGCTGGGGGTCGCAATGGGCGCTGGTGCGGCTGCCCGAGGACCGGCGCGACGCCGA CGTGGAGCGCCTGCATTCCGGTCTGGGCCAGGCCATTCCGCAGCAGAGCCGCACCTCGATCGTGCACGGCGACTACCGGA TCGACAATACGATCCTGGACGCCGACGATCCGACCAAGGTGCGCGCCGTCGTCGACTGGGAGCTGTCCACGCTGGGGGAT CCGCTCTCGGATGCCGCCTTGATGTGTGTCTACCGCGATCCCGCGCTGGACCTGATCGTCAACGCGCAGGCCGCGTGGAC GTCGCCGTTGTTGCCGACGGCCGACGAACTGGCCGACCGCTATTCGCTGGTGGCCGGGATACCGCTGGCGCATTGGGAGT TCTACATGGCGTTGGCGTATTTCAAACTCGCCATCATCGCCGCGGGCATCGACTTCCGTCGCCGGATGTCGGATCAGGCC CGCGGCCTGGGCGACGCCGCCGAGCACACGCCCGAGGTGGTGGCGCCGCTGATCTCGCGCGGCCTGGCCGAATTGGCCAA GCTGCCCGGCTAG
Upstream 100 bases:
>100_bases ACCGTGGCCGCGGTCAACAGCACCGAACACGTCTGGGACCTGCTGCCCCGAAACCAAAGGTGGTGAACGGGGTGCGGGCC GGCGATGGTAGACAAGTTCG
Downstream 100 bases:
>100_bases CGCCCGCCGGCCGCGTGCTGCTTTTTCGCCACGCGGCGCAGCTGCAGGATCCGCGCGGTGCCGACCGCCACCGTGATCAG CCCGCCGACCACCGCGGCCA
Product: FadE36
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase Family; Acyl-CoA Dehydrogenase; Acyl-Co A Dehydrogenase; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTSADQLEGLDLAALDSYLRSLGIGRDGELRAEFISGGRSNLTFRVYDDATSWLVRRPPLHGLTPSAHDMAREYRVVAAL QDTPVPVARTIGLCEDESVLGAPFQIVEFVAGQVVRRRAQLESFSHTVIEGCVDSLIRVLVDLHSVDPDAVGLADFGKPS GYLERQVRRWGSQWALVRLPEDRRDADVERLHSGLGQAIPQQSRTSIVHGDYRIDNTILDADDPTKVRAVVDWELSTLGD PLSDAALMCVYRDPALDLIVNAQAAWTSPLLPTADELADRYSLVAGIPLAHWEFYMALAYFKLAIIAAGIDFRRRMSDQA RGLGDAAEHTPEVVAPLISRGLAELAKLPG
Sequences:
>Translated_350_residues MTSADQLEGLDLAALDSYLRSLGIGRDGELRAEFISGGRSNLTFRVYDDATSWLVRRPPLHGLTPSAHDMAREYRVVAAL QDTPVPVARTIGLCEDESVLGAPFQIVEFVAGQVVRRRAQLESFSHTVIEGCVDSLIRVLVDLHSVDPDAVGLADFGKPS GYLERQVRRWGSQWALVRLPEDRRDADVERLHSGLGQAIPQQSRTSIVHGDYRIDNTILDADDPTKVRAVVDWELSTLGD PLSDAALMCVYRDPALDLIVNAQAAWTSPLLPTADELADRYSLVAGIPLAHWEFYMALAYFKLAIIAAGIDFRRRMSDQA RGLGDAAEHTPEVVAPLISRGLAELAKLPG >Mature_349_residues TSADQLEGLDLAALDSYLRSLGIGRDGELRAEFISGGRSNLTFRVYDDATSWLVRRPPLHGLTPSAHDMAREYRVVAALQ DTPVPVARTIGLCEDESVLGAPFQIVEFVAGQVVRRRAQLESFSHTVIEGCVDSLIRVLVDLHSVDPDAVGLADFGKPSG YLERQVRRWGSQWALVRLPEDRRDADVERLHSGLGQAIPQQSRTSIVHGDYRIDNTILDADDPTKVRAVVDWELSTLGDP LSDAALMCVYRDPALDLIVNAQAAWTSPLLPTADELADRYSLVAGIPLAHWEFYMALAYFKLAIIAAGIDFRRRMSDQAR GLGDAAEHTPEVVAPLISRGLAELAKLPG
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=312, Percent_Identity=36.8589743589744, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI211971008, Length=312, Percent_Identity=36.8589743589744, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI38505218, Length=339, Percent_Identity=30.0884955752212, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI17562446, Length=321, Percent_Identity=28.9719626168224, Blast_Score=152, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38388; Mature: 38257
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSADQLEGLDLAALDSYLRSLGIGRDGELRAEFISGGRSNLTFRVYDDATSWLVRRPPL CCCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHEECCCC HGLTPSAHDMAREYRVVAALQDTPVPVARTIGLCEDESVLGAPFQIVEFVAGQVVRRRAQ CCCCCCHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LESFSHTVIEGCVDSLIRVLVDLHSVDPDAVGLADFGKPSGYLERQVRRWGSQWALVRLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHCCCEEEEECC EDRRDADVERLHSGLGQAIPQQSRTSIVHGDYRIDNTILDADDPTKVRAVVDWELSTLGD CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCEEECCEEECCCCCCEEEEEEEEEHHHCCC PLSDAALMCVYRDPALDLIVNAQAAWTSPLLPTADELADRYSLVAGIPLAHWEFYMALAY CCCCCEEEEEECCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH FKLAIIAAGIDFRRRMSDQARGLGDAAEHTPEVVAPLISRGLAELAKLPG HHHHHHHHCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSADQLEGLDLAALDSYLRSLGIGRDGELRAEFISGGRSNLTFRVYDDATSWLVRRPPL CCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHEECCCC HGLTPSAHDMAREYRVVAALQDTPVPVARTIGLCEDESVLGAPFQIVEFVAGQVVRRRAQ CCCCCCHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LESFSHTVIEGCVDSLIRVLVDLHSVDPDAVGLADFGKPSGYLERQVRRWGSQWALVRLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHCCCEEEEECC EDRRDADVERLHSGLGQAIPQQSRTSIVHGDYRIDNTILDADDPTKVRAVVDWELSTLGD CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCEEECCEEECCCCCCEEEEEEEEEHHHCCC PLSDAALMCVYRDPALDLIVNAQAAWTSPLLPTADELADRYSLVAGIPLAHWEFYMALAY CCCCCEEEEEECCCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH FKLAIIAAGIDFRRRMSDQARGLGDAAEHTPEVVAPLISRGLAELAKLPG HHHHHHHHCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA