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The map label for this gene is 41406300

Identifier: 41406300

GI number: 41406300

Start: 206067

End: 207641

Strand: Direct

Name: 41406300

Synonym: MAP0202

Alternate gene names: NA

Gene position: 206067-207641 (Clockwise)

Preceding gene: 41406299

Following gene: 41406303

Centisome position: 4.27

GC content: 70.16

Gene sequence:

>1575_bases
ATGAATGACTACGACGCGATCGTCATCGGCGCGGGCCACAACGGGCTGACCGCCGCGGTGCTGCTGCAGAAGGCCGGGCT
GCGCACCCTGTGCCTGGACGCCAAGCTCTACGCCGGCGGGATGGCCTCCACCGTCGAGCTTTTCGACGGCTACCGGTTCG
AGATCGCCGGGTCGGTGCAGTTCCCGACCTCGCAGGCGGTGGTCGACGAGCTGGGCCTGGACACCATCCCGACGATCGAT
TTGGACGTGATGTCGGTGGCGGTGCGCGGTGTCGGGGACGATCCGCTGGTCCAATACAGCGACCCGGTCAAGCTGTTCAC
CCACCTCAACGAGGTGCACGGGGCCGACGCCGTCAACGGGATGGCCGGCCTGATGGCGTGGGCCCAGGCCCCGACCCGCG
CGCTGGGCCGGTTCGAGGCCGGCACGCCGCCCAAGAGTCTCGACGAGATGTATGCCTGCGCCACAAACGAATTCGAGCGC
TCGGCGATCGACGACATGCTGTTCGGGTCGGTCACCGACATCCTGGACCGCTACCTGCCCGACCGCGAGAAGCACGGCGC
CCTGCGCGGCTCGATGACCGTGCTGGCCGTCAACACGCTCTATCGCGGCCCGGCCACCCCGGGCAGCGCCGCGGCGCTGG
CGTTCGGCCTCGGCGTGCCGGACGGCGACACCATGCAGATGAAGAAGCTGCGCGGCGGCATCGGCGTGCTCACGTCGCAC
CTGTGCGACGTGCTGGAGCGCCACGGCGGCGAACTTCGGTTGCGCACCAAGGTGACCGAGATCCTGGTCGAGCACGCCGG
GTCCGGGGGACGGGTGACCGGGGTGCGCACCGAGTCGGGCGAGACGCTGAGCGCCCCGATCGTCGTCTCCGGCATCGCGC
CGGACGTCACGCTCAACGAGCTGCTCGATCCGGCCGCGCTGCCCGCCGACCTGCGGGCGCGCTATGCGCGCATCGACCAC
CGCGGCAGCTACCTGCAGATGCATTTCGCGCTGCAGGAGGCGCCGGTGTTCGCCGCGCCGTACCAGGTGCTCAACGAGCC
TGTCATGCAGGCCTCGATCGGCCTGTTCTGCACGCCCGAGGAGGTGCAGCAGCAGTGGGAGCAGGCCCGGCGCGGCGTCG
TTCCGGCCGACCCGACCGTCGTGCTGCAGATCCCCTCGCAGAACGATCCGGGCCTGGCCCCGGAGGGCAAGCACGCCGCG
TCGGCGTTCGCGTTGTGGTTCCCGATCGAGGGCGAGGTGGACTACGGCCGGGCGAAAATCGAGATGGGGCAACGGGTGAT
CGACAAGATCACCCGGCTGGCACCGAATTTCGAGGACAGCATCATCCGGCACACCACCTTCACGCCCCGGCACATGGGCG
TCATGTTCGGCGCCCCCGGCGGCGACTACTGCCACGGCCTGCTGAACGCGAACCAGGTCGGGCCCAACCGGCCCGGTCCG
CGCGGCTTCCTCGGCCAGCCGATCCCGATCGAGGGCCTGTATCTGGGCAGCGCGGGCTGCCACGGCGGTCCGGGCATCAC
CTTCATCCCCGGCTACAACGCGGCCCGGCAGGCACTGACCGACCGCAGCGGCTGA

Upstream 100 bases:

>100_bases
GGGGATCACCGACTCCTGGAGCACCGCCACCGCGCCCCAAGTTTCGTCATAATTGACAAAACTTGGGGCGTCGTGCGAGC
CTCCTTGCGGAGGTCGGGAC

Downstream 100 bases:

>100_bases
GTCAGGAGCCGCGCCGGGCGAGCAATTCGTCCAGCAGGGCGGTGAACTCGTCGGGCCGCGCCGGCGTGAAGGCCGGGGCG
GGCCGGGTGCCCGGCACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Phytoene Dehydrogenase; Dehydrogenase; Oxidoreductase Family Protein; Amine Oxidase; Beta-Carotene Ketolase; Phytoene Dehydrogenase-Related Protein; Oxidoreductase; Flavin Containing Amine Oxidase; Phytoene Desaturase Family Protein; FAD Dependent Oxidoreductase Phytoene Dehydrogenase; Dehydrogenase/Oxidoreductase; FAD Dependent Oxidoreductase Domain Protein; Phytoene Dehydrogenase Oxidoreductase Protein; B-Carotene Ketolase; Fad-Dependent Oxidoreductase; Thiamine Biosynthesis Thi4 Protein; Zeta-Carotene Desaturase; Phytoene Dehydrogenase Family Protein; Transmembrane Protein

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MNDYDAIVIGAGHNGLTAAVLLQKAGLRTLCLDAKLYAGGMASTVELFDGYRFEIAGSVQFPTSQAVVDELGLDTIPTID
LDVMSVAVRGVGDDPLVQYSDPVKLFTHLNEVHGADAVNGMAGLMAWAQAPTRALGRFEAGTPPKSLDEMYACATNEFER
SAIDDMLFGSVTDILDRYLPDREKHGALRGSMTVLAVNTLYRGPATPGSAAALAFGLGVPDGDTMQMKKLRGGIGVLTSH
LCDVLERHGGELRLRTKVTEILVEHAGSGGRVTGVRTESGETLSAPIVVSGIAPDVTLNELLDPAALPADLRARYARIDH
RGSYLQMHFALQEAPVFAAPYQVLNEPVMQASIGLFCTPEEVQQQWEQARRGVVPADPTVVLQIPSQNDPGLAPEGKHAA
SAFALWFPIEGEVDYGRAKIEMGQRVIDKITRLAPNFEDSIIRHTTFTPRHMGVMFGAPGGDYCHGLLNANQVGPNRPGP
RGFLGQPIPIEGLYLGSAGCHGGPGITFIPGYNAARQALTDRSG

Sequences:

>Translated_524_residues
MNDYDAIVIGAGHNGLTAAVLLQKAGLRTLCLDAKLYAGGMASTVELFDGYRFEIAGSVQFPTSQAVVDELGLDTIPTID
LDVMSVAVRGVGDDPLVQYSDPVKLFTHLNEVHGADAVNGMAGLMAWAQAPTRALGRFEAGTPPKSLDEMYACATNEFER
SAIDDMLFGSVTDILDRYLPDREKHGALRGSMTVLAVNTLYRGPATPGSAAALAFGLGVPDGDTMQMKKLRGGIGVLTSH
LCDVLERHGGELRLRTKVTEILVEHAGSGGRVTGVRTESGETLSAPIVVSGIAPDVTLNELLDPAALPADLRARYARIDH
RGSYLQMHFALQEAPVFAAPYQVLNEPVMQASIGLFCTPEEVQQQWEQARRGVVPADPTVVLQIPSQNDPGLAPEGKHAA
SAFALWFPIEGEVDYGRAKIEMGQRVIDKITRLAPNFEDSIIRHTTFTPRHMGVMFGAPGGDYCHGLLNANQVGPNRPGP
RGFLGQPIPIEGLYLGSAGCHGGPGITFIPGYNAARQALTDRSG
>Mature_524_residues
MNDYDAIVIGAGHNGLTAAVLLQKAGLRTLCLDAKLYAGGMASTVELFDGYRFEIAGSVQFPTSQAVVDELGLDTIPTID
LDVMSVAVRGVGDDPLVQYSDPVKLFTHLNEVHGADAVNGMAGLMAWAQAPTRALGRFEAGTPPKSLDEMYACATNEFER
SAIDDMLFGSVTDILDRYLPDREKHGALRGSMTVLAVNTLYRGPATPGSAAALAFGLGVPDGDTMQMKKLRGGIGVLTSH
LCDVLERHGGELRLRTKVTEILVEHAGSGGRVTGVRTESGETLSAPIVVSGIAPDVTLNELLDPAALPADLRARYARIDH
RGSYLQMHFALQEAPVFAAPYQVLNEPVMQASIGLFCTPEEVQQQWEQARRGVVPADPTVVLQIPSQNDPGLAPEGKHAA
SAFALWFPIEGEVDYGRAKIEMGQRVIDKITRLAPNFEDSIIRHTTFTPRHMGVMFGAPGGDYCHGLLNANQVGPNRPGP
RGFLGQPIPIEGLYLGSAGCHGGPGITFIPGYNAARQALTDRSG

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=365, Percent_Identity=29.8630136986301, Blast_Score=135, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI17540238, Length=559, Percent_Identity=26.2969588550984, Blast_Score=155, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55887; Mature: 55887

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYDAIVIGAGHNGLTAAVLLQKAGLRTLCLDAKLYAGGMASTVELFDGYRFEIAGSVQ
CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCHHHCCCCHHHHHHHCCEEEEEEECEE
FPTSQAVVDELGLDTIPTIDLDVMSVAVRGVGDDPLVQYSDPVKLFTHLNEVHGADAVNG
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCHHHHH
MAGLMAWAQAPTRALGRFEAGTPPKSLDEMYACATNEFERSAIDDMLFGSVTDILDRYLP
HHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
DREKHGALRGSMTVLAVNTLYRGPATPGSAAALAFGLGVPDGDTMQMKKLRGGIGVLTSH
CCHHCCCCCCCEEEEEEEHHHCCCCCCCCHHHEEEECCCCCCCHHHHHHHHCCHHHHHHH
LCDVLERHGGELRLRTKVTEILVEHAGSGGRVTGVRTESGETLSAPIVVSGIAPDVTLNE
HHHHHHHCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCEEEECCCCCCCHHH
LLDPAALPADLRARYARIDHRGSYLQMHFALQEAPVFAAPYQVLNEPVMQASIGLFCTPE
HCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCHHHHCCHHHHHCCCEEECHH
EVQQQWEQARRGVVPADPTVVLQIPSQNDPGLAPEGKHAASAFALWFPIEGEVDYGRAKI
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHH
EMGQRVIDKITRLAPNFEDSIIRHTTFTPRHMGVMFGAPGGDYCHGLLNANQVGPNRPGP
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHCEEEEECCCHHHHHHHCCCCCCCCCCCCC
RGFLGQPIPIEGLYLGSAGCHGGPGITFIPGYNAARQALTDRSG
CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MNDYDAIVIGAGHNGLTAAVLLQKAGLRTLCLDAKLYAGGMASTVELFDGYRFEIAGSVQ
CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCHHHCCCCHHHHHHHCCEEEEEEECEE
FPTSQAVVDELGLDTIPTIDLDVMSVAVRGVGDDPLVQYSDPVKLFTHLNEVHGADAVNG
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCHHHHH
MAGLMAWAQAPTRALGRFEAGTPPKSLDEMYACATNEFERSAIDDMLFGSVTDILDRYLP
HHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
DREKHGALRGSMTVLAVNTLYRGPATPGSAAALAFGLGVPDGDTMQMKKLRGGIGVLTSH
CCHHCCCCCCCEEEEEEEHHHCCCCCCCCHHHEEEECCCCCCCHHHHHHHHCCHHHHHHH
LCDVLERHGGELRLRTKVTEILVEHAGSGGRVTGVRTESGETLSAPIVVSGIAPDVTLNE
HHHHHHHCCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCEEEECCCCCCCHHH
LLDPAALPADLRARYARIDHRGSYLQMHFALQEAPVFAAPYQVLNEPVMQASIGLFCTPE
HCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCHHHHCCHHHHHCCCEEECHH
EVQQQWEQARRGVVPADPTVVLQIPSQNDPGLAPEGKHAASAFALWFPIEGEVDYGRAKI
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHH
EMGQRVIDKITRLAPNFEDSIIRHTTFTPRHMGVMFGAPGGDYCHGLLNANQVGPNRPGP
HHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHCEEEEECCCHHHHHHHCCCCCCCCCCCCC
RGFLGQPIPIEGLYLGSAGCHGGPGITFIPGYNAARQALTDRSG
CCCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA