Click here to switch to the map view.

The map label for this gene is 41406259

Identifier: 41406259

GI number: 41406259

Start: 163308

End: 163595

Strand: Direct

Name: 41406259

Synonym: MAP0161

Alternate gene names: NA

Gene position: 163308-163595 (Clockwise)

Preceding gene: 41406258

Following gene: 41406260

Centisome position: 3.38

GC content: 67.36

Gene sequence:

>288_bases
ATGTCCGACCCGATCACTTACAACCCGGGCGCGGTGGCCGACTTCGCCACCGACGTCGCCTCCCGCGCCGGCCAGTTGCA
GTCCATTTTCGACGACACCTCCAACCGCACGCACGCCCTGCAGGAATTCTTCGCCGGGCACGGCGCGTCGGGCTTTTTCG
AGGCGCAGGCCCAGATGCTGTCCGGGCTGCAGGGGCTCATCGACACGATCCGCCAGCACGGGCAGACCACCTCGCACGTG
CTGGACAGCGCGATCAGCACGGACCAGCACATCGCCGGCCTGTTCTGA

Upstream 100 bases:

>100_bases
GAGGCGGATTCCTCGCACGCATTCAGCGCCCTATTCGGCGGCCACGGCTCCTGACCCACCAAATCCATTCCCATAACAGG
CTTTTGAAAGGAAATTGATC

Downstream 100 bases:

>100_bases
GCCGGCACGACCGGAACGAGGGTGGGGCAGATGCGCCGAGCGTGTGCCCCACCTTTCGTCTTTCTTCCCCGGCTGGGGAT
CCCGCGCGGTGAGGGCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3890c

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSDPITYNPGAVADFATDVASRAGQLQSIFDDTSNRTHALQEFFAGHGASGFFEAQAQMLSGLQGLIDTIRQHGQTTSHV
LDSAISTDQHIAGLF

Sequences:

>Translated_95_residues
MSDPITYNPGAVADFATDVASRAGQLQSIFDDTSNRTHALQEFFAGHGASGFFEAQAQMLSGLQGLIDTIRQHGQTTSHV
LDSAISTDQHIAGLF
>Mature_94_residues
SDPITYNPGAVADFATDVASRAGQLQSIFDDTSNRTHALQEFFAGHGASGFFEAQAQMLSGLQGLIDTIRQHGQTTSHVL
DSAISTDQHIAGLF

Specific function: Unknown

COG id: COG4842

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ESAT-6 (esx) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ES6LB_MYCPA (Q9K548)

Other databases:

- EMBL:   AJ250015
- EMBL:   AE016958
- RefSeq:   NP_959095.1
- ProteinModelPortal:   Q9K548
- EnsemblBacteria:   EBMYCT00000036916
- GeneID:   2717622
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP0161
- NMPDR:   fig|262316.1.peg.161
- GeneTree:   EBGT00050000017901
- HOGENOM:   HBG571199
- OMA:   NAIGADQ
- ProtClustDB:   CLSK792791
- InterPro:   IPR010310
- InterPro:   IPR020167
- ProDom:   PD065399

Pfam domain/function: PF06013 WXG100

EC number: NA

Molecular weight: Translated: 10110; Mature: 9979

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPITYNPGAVADFATDVASRAGQLQSIFDDTSNRTHALQEFFAGHGASGFFEAQAQML
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
SGLQGLIDTIRQHGQTTSHVLDSAISTDQHIAGLF
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure 
SDPITYNPGAVADFATDVASRAGQLQSIFDDTSNRTHALQEFFAGHGASGFFEAQAQML
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH
SGLQGLIDTIRQHGQTTSHVLDSAISTDQHIAGLF
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA