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The map label for this gene is yxaF [H]

Identifier: 41406253

GI number: 41406253

Start: 158601

End: 159179

Strand: Direct

Name: yxaF [H]

Synonym: MAP0155

Alternate gene names: 41406253

Gene position: 158601-159179 (Clockwise)

Preceding gene: 41406252

Following gene: 41406254

Centisome position: 3.28

GC content: 73.06

Gene sequence:

>579_bases
ATGGCCACGGCGACCCGCGAACGGTTCCTGACCGCGGCCACCGGACTCTTTCGGCGCCAAGGCTATTCGGGCACCGGCCT
CAAACAGATCGTCGCCGAGAGCCGGGCCCCGCTGGGCTCGTTGTATCACTTCTTCCCCGGCGGCAAGCAAGACCTGGCCG
TGCAGGCGATCGCCCACACCGCCGAGCGCTACCGGGAACTGCTCGACCGGGTGTTCGCCAGGTCCACCGACATCGGGCAG
GCCACCGTCACGTGGTTCAACTGGGCCGCCCGCGCCCTGCAGGAAACCGACTACGCCGACGGCTGCCCGATCGGCACGGT
GGCCTGCGAGGTCGCCAGCAGCAACGAGGCGCTGCGGCAAGCCACCCAGGCGGTGTTCGCGTCCTGGCAGTCCCGGGTGG
CCGCCGAACTGATCGGCGCGGGTGTCCCGACCGCGCAGGCCCGCCGGCTGGCGACGTTCGCGGTGGCCAGCCTGGAGGGG
GCGATCCTACTCGCCCGGGCGCACCGCAGCACCCGGCCGCTGCGCGACACCGGCCGCGTCGTCGCCGACACCCTGCGCGC
GGCCACCGACCGCGGCTGA

Upstream 100 bases:

>100_bases
CGCTGGACGAGCAACTCGAGCGGGAGGCGATGAGCGCCTACTCCATCGATCGGCACAGCGCCCGCGAGATCATCGCCGCG
GTCGGGATGCGGGGCCACTG

Downstream 100 bases:

>100_bases
CCGGGCGACTCGACTCATGCTCGGCCACCTCGGCATCAACGTGCCCGACCTGTCCGTCGCCAAGCGGTATTACGACGCGC
TGATGCCGCTGGTCGGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MATATRERFLTAATGLFRRQGYSGTGLKQIVAESRAPLGSLYHFFPGGKQDLAVQAIAHTAERYRELLDRVFARSTDIGQ
ATVTWFNWAARALQETDYADGCPIGTVACEVASSNEALRQATQAVFASWQSRVAAELIGAGVPTAQARRLATFAVASLEG
AILLARAHRSTRPLRDTGRVVADTLRAATDRG

Sequences:

>Translated_192_residues
MATATRERFLTAATGLFRRQGYSGTGLKQIVAESRAPLGSLYHFFPGGKQDLAVQAIAHTAERYRELLDRVFARSTDIGQ
ATVTWFNWAARALQETDYADGCPIGTVACEVASSNEALRQATQAVFASWQSRVAAELIGAGVPTAQARRLATFAVASLEG
AILLARAHRSTRPLRDTGRVVADTLRAATDRG
>Mature_191_residues
ATATRERFLTAATGLFRRQGYSGTGLKQIVAESRAPLGSLYHFFPGGKQDLAVQAIAHTAERYRELLDRVFARSTDIGQA
TVTWFNWAARALQETDYADGCPIGTVACEVASSNEALRQATQAVFASWQSRVAAELIGAGVPTAQARRLATFAVASLEGA
ILLARAHRSTRPLRDTGRVVADTLRAATDRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20668; Mature: 20536

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATATRERFLTAATGLFRRQGYSGTGLKQIVAESRAPLGSLYHFFPGGKQDLAVQAIAHT
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH
AERYRELLDRVFARSTDIGQATVTWFNWAARALQETDYADGCPIGTVACEVASSNEALRQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHH
ATQAVFASWQSRVAAELIGAGVPTAQARRLATFAVASLEGAILLARAHRSTRPLRDTGRV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEHHHCCCCCCHHHHHH
VADTLRAATDRG
HHHHHHHHCCCC
>Mature Secondary Structure 
ATATRERFLTAATGLFRRQGYSGTGLKQIVAESRAPLGSLYHFFPGGKQDLAVQAIAHT
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHH
AERYRELLDRVFARSTDIGQATVTWFNWAARALQETDYADGCPIGTVACEVASSNEALRQ
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHH
ATQAVFASWQSRVAAELIGAGVPTAQARRLATFAVASLEGAILLARAHRSTRPLRDTGRV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEHHHCCCCCCHHHHHH
VADTLRAATDRG
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]