| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406219
Identifier: 41406219
GI number: 41406219
Start: 130222
End: 130782
Strand: Direct
Name: 41406219
Synonym: MAP0121
Alternate gene names: NA
Gene position: 130222-130782 (Clockwise)
Preceding gene: 41406216
Following gene: 41406220
Centisome position: 2.7
GC content: 69.7
Gene sequence:
>561_bases ATGACCGTGATGCAGCGACCGGCGGGCGGGCTCACTGGCGTCCGGGAGGTGGCGTTCCCCCTGCTCGCGGTCGGCATCAT CGTCGCCTGCACCGACGTCCGGATTCCGCTGGCTCTGCCGGGACACCGCGGGTTGGTCTGGCTGACCATGCTGGCGGCGG TTGCGCTGGTGACGGCACGGCGCGAGACGGTGCTCGCGGTCGGTGCGGCGTCATCGATCGCGGCGTTGCCGGTGCACGGG TTGACCGATCCGTTGTGGAGCAGTCGCTATGTGGCCGCCGCCGTGTTGCTGTATGCCGTGGCTTCCCTTCCCGCGGTGCG GACGCGCCGGTGGATACTCGCGGTCGCAGCCGCGCCCGTTCACCTTGTGGCGCTTGCCAGTTCGGTCTTGACGTGGCACT CCGGAGCCAACCTGTCAGCCTGGGCATCGCACGGGATGCTCGAGCGGGGGGGCTGGCATCTGGTTTTCGGGTTCGTCGCC GGCCTGCTCGCCTGGGTGGTGGCGCTTGGTCTGGGTCGCCCGCCGTCGGTGCGGGTCGGCGCATATGGAAGCCGATACTA A
Upstream 100 bases:
>100_bases ACCCGAGCTACCCGTCTATTTCTGCGCATTTACGGATCCCATCCTGTGAATACGCCGTAAATACGGATAAGTGTAGGTCC TGGCCGCTTATGATCCCCGC
Downstream 100 bases:
>100_bases GGAGCGGCCGCTATGACGCTGCGAGTTATTCCCGAGGGCCTGGCCGCGACGAGTGCGGCGGTCGACGCGATCACCGCTCA ACTGGCGGCCGTGCATGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTVMQRPAGGLTGVREVAFPLLAVGIIVACTDVRIPLALPGHRGLVWLTMLAAVALVTARRETVLAVGAASSIAALPVHG LTDPLWSSRYVAAAVLLYAVASLPAVRTRRWILAVAAAPVHLVALASSVLTWHSGANLSAWASHGMLERGGWHLVFGFVA GLLAWVVALGLGRPPSVRVGAYGSRY
Sequences:
>Translated_186_residues MTVMQRPAGGLTGVREVAFPLLAVGIIVACTDVRIPLALPGHRGLVWLTMLAAVALVTARRETVLAVGAASSIAALPVHG LTDPLWSSRYVAAAVLLYAVASLPAVRTRRWILAVAAAPVHLVALASSVLTWHSGANLSAWASHGMLERGGWHLVFGFVA GLLAWVVALGLGRPPSVRVGAYGSRY >Mature_185_residues TVMQRPAGGLTGVREVAFPLLAVGIIVACTDVRIPLALPGHRGLVWLTMLAAVALVTARRETVLAVGAASSIAALPVHGL TDPLWSSRYVAAAVLLYAVASLPAVRTRRWILAVAAAPVHLVALASSVLTWHSGANLSAWASHGMLERGGWHLVFGFVAG LLAWVVALGLGRPPSVRVGAYGSRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19410; Mature: 19279
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVMQRPAGGLTGVREVAFPLLAVGIIVACTDVRIPLALPGHRGLVWLTMLAAVALVTAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH RETVLAVGAASSIAALPVHGLTDPLWSSRYVAAAVLLYAVASLPAVRTRRWILAVAAAPV HHHEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HLVALASSVLTWHSGANLSAWASHGMLERGGWHLVFGFVAGLLAWVVALGLGRPPSVRVG HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC AYGSRY CCCCCC >Mature Secondary Structure TVMQRPAGGLTGVREVAFPLLAVGIIVACTDVRIPLALPGHRGLVWLTMLAAVALVTAR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH RETVLAVGAASSIAALPVHGLTDPLWSSRYVAAAVLLYAVASLPAVRTRRWILAVAAAPV HHHEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HLVALASSVLTWHSGANLSAWASHGMLERGGWHLVFGFVAGLLAWVVALGLGRPPSVRVG HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC AYGSRY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA