| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406200
Identifier: 41406200
GI number: 41406200
Start: 108376
End: 108879
Strand: Direct
Name: 41406200
Synonym: MAP0102
Alternate gene names: NA
Gene position: 108376-108879 (Clockwise)
Preceding gene: 41406199
Following gene: 41406202
Centisome position: 2.24
GC content: 66.67
Gene sequence:
>504_bases GTGCCGGCGCGCACGCCGCGCCTCCGGTTAAAACCCAAAGCACCCCAAAGCGGCTATGTCGATGGCGCCTGGTGGCCCCG CAGCGATGACCTCAGCGCAGAGTTGCCAGACCTGTTGGCAGTGCTCTCGGTGCGCCTGGGCCGCATCGACCGAGTGCTAT ACCACCTGAACGCCTGGGCGGACGCGCCACGAAAGCTCGCCACCGGAGGACGGGCGGTACGCCTAGACGGGTACCGGCTT CAGCCGATCAACACCATCGAAGTTCTCGGGCTCGAGGGTGACCGACTCACGCTATTGGTGATTCCGCCCGACACCGACGC GAACGACGCCCACCGCACCATGATGACCGCGGCACAACCTCGCAACGCCGCGACCGTCGACGGATTGCTCACGATCAGCC AGCGAGACCGGGACAGCCGCACCCAGGCCTCCACCGCACAAGAACGCTGGGAATCAGAAGGCGGAACTACAGCTTCCCCA CGGCCGGCGCAGCTCCCCGGCTGA
Upstream 100 bases:
>100_bases GGCATCGCTGATTCGAAGTGATATGGCCGCATCACGCGGTCCAGATGGGAGCGTCGCCATGACGCCACAGCAGACACGCA GAAACGATGAGAACACCATC
Downstream 100 bases:
>100_bases CGCCGGAACCTCGCCCGCGGCCCCGCATCCGAGGGAGGACATGCCGGGCACTTATGAGCGGTGACGAAACAGCCCGTGCC GCTTCCGCTTCTCGTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPARTPRLRLKPKAPQSGYVDGAWWPRSDDLSAELPDLLAVLSVRLGRIDRVLYHLNAWADAPRKLATGGRAVRLDGYRL QPINTIEVLGLEGDRLTLLVIPPDTDANDAHRTMMTAAQPRNAATVDGLLTISQRDRDSRTQASTAQERWESEGGTTASP RPAQLPG
Sequences:
>Translated_167_residues MPARTPRLRLKPKAPQSGYVDGAWWPRSDDLSAELPDLLAVLSVRLGRIDRVLYHLNAWADAPRKLATGGRAVRLDGYRL QPINTIEVLGLEGDRLTLLVIPPDTDANDAHRTMMTAAQPRNAATVDGLLTISQRDRDSRTQASTAQERWESEGGTTASP RPAQLPG >Mature_166_residues PARTPRLRLKPKAPQSGYVDGAWWPRSDDLSAELPDLLAVLSVRLGRIDRVLYHLNAWADAPRKLATGGRAVRLDGYRLQ PINTIEVLGLEGDRLTLLVIPPDTDANDAHRTMMTAAQPRNAATVDGLLTISQRDRDSRTQASTAQERWESEGGTTASPR PAQLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18311; Mature: 18180
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARTPRLRLKPKAPQSGYVDGAWWPRSDDLSAELPDLLAVLSVRLGRIDRVLYHLNAWA CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DAPRKLATGGRAVRLDGYRLQPINTIEVLGLEGDRLTLLVIPPDTDANDAHRTMMTAAQP CCCHHHHCCCCEEEECCEEECCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCC RNAATVDGLLTISQRDRDSRTQASTAQERWESEGGTTASPRPAQLPG CCCCEECEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PARTPRLRLKPKAPQSGYVDGAWWPRSDDLSAELPDLLAVLSVRLGRIDRVLYHLNAWA CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DAPRKLATGGRAVRLDGYRLQPINTIEVLGLEGDRLTLLVIPPDTDANDAHRTMMTAAQP CCCHHHHCCCCEEEECCEEECCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCC RNAATVDGLLTISQRDRDSRTQASTAQERWESEGGTTASPRPAQLPG CCCCEECEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA