| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406164
Identifier: 41406164
GI number: 41406164
Start: 73943
End: 74584
Strand: Direct
Name: 41406164
Synonym: MAP0066
Alternate gene names: NA
Gene position: 73943-74584 (Clockwise)
Preceding gene: 41406163
Following gene: 41406165
Centisome position: 1.53
GC content: 70.25
Gene sequence:
>642_bases ATGACGCTGATCGCCATCCCGCTGTTCCCGCGGGTCACCACACTGGATGCGGTGGGACCTTACGAAGTGCTGCAACGGAT TCCGTCTGTCCAGGTCGTGTTCGTCGGGCAGCGCCGGGGCGAGGTGCGCACCGAGAACGGGATGCTGGGCCTGGCCTGCG ACGCCACCTTCGACGAGGTGAGCGCACCGGACGTGGTGGTGTTCCCCGGCGGCATCGGCACCCGGCAGCTCATTCACGAC GAGGCAGTCCGGGCCTGGCTGCAAGCGGTGCACCCGCACACCAGATTCACCACCTCGGTGTGCACCGGCGCGCTGCTGCT GGCCGCGGCCGGTCTGCTCGACGGACTCACCGCCACCACGCACTGGCGCGCCGCCGACCTGCTCAACGGATTGGGCGCCC GCTACGTGGAGCAACGAGTCGTCGAACACCTGCCGCAGCGCATCATCACCGCGGCCGGGGTGTCCAGCGGCATCGACATG GCCCTGCGGCTGGTGGAGCTGCTCGTCGACCGCCAGGCCGCGCAGGCCGCCCAGCTGCTCATCGAATACGACCCGCAGCC GCCCTTCGACTCGGGTGCGTTCGGCAAGGCCGATGCGGCGACCGTGGCCCGGGCCGAGGAATACCTGACCGGCCGGCGCT GA
Upstream 100 bases:
>100_bases CACCCGACGCGCCACCGGGCTGGCTGCCGGACTGGCTGCGGCCGGCCGGATCGCGCCGCGGGCAGGCCGCGGAGCCCGAA CCCGCGCTGGCCGGGGCGAC
Downstream 100 bases:
>100_bases GGCGATTGCCCGACCGCGCGGATTTTTCTGGTCAGCCCGCTATCCGGTAGCCTGGGGCGGTTGCCGACGCAGGCGACCCT CCTGCCACGGAACGACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; AraC Family Transcriptional Regulator; Transcriptional Regulator; ThiJ Family Protein; DJ-1/PfpI Superfamily Protein; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcription Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; Transcriptional Regulatory Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Twin-Arginine Translocation Pathway Signal; Transcriptional Regulator AraC Family Protein; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; Transcriptional Regulator ThiJ/PfpI Family Protein; Thij/Pfpi Family Protein; ThiH/PfpI Family Amidotransferase; Transcriptional Regulator Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEVSAPDVVVFPGGIGTRQLIHD EAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATTHWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDM ALRLVELLVDRQAAQAAQLLIEYDPQPPFDSGAFGKADAATVARAEEYLTGRR
Sequences:
>Translated_213_residues MTLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEVSAPDVVVFPGGIGTRQLIHD EAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATTHWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDM ALRLVELLVDRQAAQAAQLLIEYDPQPPFDSGAFGKADAATVARAEEYLTGRR >Mature_212_residues TLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEVSAPDVVVFPGGIGTRQLIHDE AVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATTHWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDMA LRLVELLVDRQAAQAAQLLIEYDPQPPFDSGAFGKADAATVARAEEYLTGRR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22907; Mature: 22775
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEV CEEEEEECCCCHHHHCCCCHHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEECCCHHHC SAPDVVVFPGGIGTRQLIHDEAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATT CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH HWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDMALRLVELLVDRQAAQAAQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IEYDPQPPFDSGAFGKADAATVARAEEYLTGRR HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TLIAIPLFPRVTTLDAVGPYEVLQRIPSVQVVFVGQRRGEVRTENGMLGLACDATFDEV EEEEEECCCCHHHHCCCCHHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEECCCHHHC SAPDVVVFPGGIGTRQLIHDEAVRAWLQAVHPHTRFTTSVCTGALLLAAAGLLDGLTATT CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH HWRAADLLNGLGARYVEQRVVEHLPQRIITAAGVSSGIDMALRLVELLVDRQAAQAAQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IEYDPQPPFDSGAFGKADAATVARAEEYLTGRR HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA