| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406140
Identifier: 41406140
GI number: 41406140
Start: 47604
End: 47927
Strand: Direct
Name: 41406140
Synonym: MAP0042
Alternate gene names: NA
Gene position: 47604-47927 (Clockwise)
Preceding gene: 41406139
Following gene: 41406143
Centisome position: 0.99
GC content: 67.28
Gene sequence:
>324_bases GTGCAGGTGTCGGATTCGGGCAGTCGCGCGAATCTCAGCGACAAGGATCTCGTCGAATCGGTTCTTCGCGAACTGAGCGA GGCGGCCGACAAGTGGGAAGCCCTGGTGGCGCAGGCCGAGGCCGTCACCTACAGCGTCGACCTGGGCGACATCTACGCCG TGGCCAATTCCGACGGCCGGCTGCTGAAGCTGACCCTGCATCCCGGGGTGATGACCGGGTACGGCCACGGCGAGTTGGCC GACCGGCTCAACCTCGCGATCACCGCGCTGCGCGAGGAAGCGGAGGCCGAGAACCGGGCGAGTTACGGCGGTCCCCTGCA CTGA
Upstream 100 bases:
>100_bases CCACCTGGCCTGGTACCGCACTCTGGCCGCGCCGTCGCCCGGAGGTTGAGCCGGCAAACCCGTCGTATGAATTGACGCTG GTCGGAGGGCTCGCGATACT
Downstream 100 bases:
>100_bases CGCGCCTCCCCTGCACTGACGGGTTCGCGCGTTTCACGCGCTCATCGCCCGGGGCCGGGCGGGCCGGCGAAGGCCTGCGC GATCTCCAGCCAGCGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MQVSDSGSRANLSDKDLVESVLRELSEAADKWEALVAQAEAVTYSVDLGDIYAVANSDGRLLKLTLHPGVMTGYGHGELA DRLNLAITALREEAEAENRASYGGPLH
Sequences:
>Translated_107_residues MQVSDSGSRANLSDKDLVESVLRELSEAADKWEALVAQAEAVTYSVDLGDIYAVANSDGRLLKLTLHPGVMTGYGHGELA DRLNLAITALREEAEAENRASYGGPLH >Mature_107_residues MQVSDSGSRANLSDKDLVESVLRELSEAADKWEALVAQAEAVTYSVDLGDIYAVANSDGRLLKLTLHPGVMTGYGHGELA DRLNLAITALREEAEAENRASYGGPLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11456; Mature: 11456
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSDSGSRANLSDKDLVESVLRELSEAADKWEALVAQAEAVTYSVDLGDIYAVANSDGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC LLKLTLHPGVMTGYGHGELADRLNLAITALREEAEAENRASYGGPLH EEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQVSDSGSRANLSDKDLVESVLRELSEAADKWEALVAQAEAVTYSVDLGDIYAVANSDGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCC LLKLTLHPGVMTGYGHGELADRLNLAITALREEAEAENRASYGGPLH EEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]