| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is cyp144 [H]
Identifier: 41406107
GI number: 41406107
Start: 11810
End: 13135
Strand: Direct
Name: cyp144 [H]
Synonym: MAP0009
Alternate gene names: 41406107
Gene position: 11810-13135 (Clockwise)
Preceding gene: 41406105
Following gene: 41406109
Centisome position: 0.24
GC content: 68.63
Gene sequence:
>1326_bases CTGCTCGCGACGGGTCACCCGCACCCGCAGGCGCCGTCCCCGGCCGTCGTCGCTCCTCAACTTCGCCGCGGCCCGTTGAC GCCGCGAGACGGCGCGTCGAGCCTGAAACGCATGGCGGTGTTGGACAGCGCGACCCGGTTCTTCGGCAGCGAGGCGATAC AGGATCCCTACCCGCTGTATGAGCGCATGCACGCCGAGGCGCCGATGCACCGGATCGGCGACTCCGTCTTCTACGCCGTG TGCGGGTGGGACGCGGTGCACGAGGCCATCGAGCGGGTCGAGGACTTCTCGTCCAACCTCACCGCGACGATGGTCTTCCA CGAGGACGGCACCGTCACCCCGTTCGACATGGGCGCGCCGGGCGCCCCGATGCACGCGCTGGCCACCGCCGACGACCCCG TGCACGCGGTGCACCGCAAGATCCTGCTGCCGCACCTTTCGGCGAAGCGAATCCGGATCATCGAGGAGTTCGCCACCCAG ACCGCCGACCGGCTGTGGGACGAGAACCTGTCCGACGGCCGGATCGAGTGGATGAGCGCCATCGCCAACCGGTTGCCCAT GATGGTGGTCTGCCGGCTGCTGGGTCTGCCCGATGACGATGTCGACAAACTCATCCGGCTCGGCTACGCCACCACCACAC TGCTGGACGGGATCGTCGCCCCCGAACAGCTCGAGCAGGCCGGCATGGCCGCCATCGAACTGTCCGGCTACGTGCTGGAG CATTTCGAAAAGGCAAGCGAGAAGCCGGAATCCAGCCTGATGGCCGATCTTGCGGCGCGCTGCGCCGCCGGCGAACTCGA GCAGCTGCCGGCGCTGGGAATCATGCTCACGCTGTTCAGCGCGGCCGGCGAATCGACCGCGTCGCTGCTGGGCAGCGCGG CCTGGATCCTGGCCGACCGGCCGGCGATCCAACGGCAGCTTCGCGAAAACCCGGAGTTGCTAAGCACTTTCATCGAAGAG ACGCTGCGCTTCGAGGCGCCGTTTCGGGGTCACTACCGCCACGTGTGGCGCGACACCACGCTGGGCGGGATCGAGCTGCC CGAGGGCGCACACCTGCTGCTGATGTGGGGAGCGGCCAACCGCGACCCGACACATTTCAAGGATCCCAACGAGTTTCGGC TCGACCGCGCGGCCGCCAAGAGCCACCTGAGCTTCGGCAAGGGCGTCCACTTCTGCGTCGGTGCCGCGCTGGCCCGGCTG GAAGCCCACATCGTGTTGCGCCGGCTGCTCGAGCGCACCAGCTGGATCGACGCGACCGACGTCGGGGATTGGCTGCCCAG CATCCTGGTCCGGCGCCGGGAACGGCTGGGGTTGGCCGTGCGCTGA
Upstream 100 bases:
>100_bases GTCGTCCCGCGCCATCCACCCATGCTCCACCACGCTGCACGACGCGCAAAGCGCTTTCGCAGCGTGAGAATTTTGTGACG AAATCTCTCACCGGAACCGC
Downstream 100 bases:
>100_bases GCTACGGCCGCGGTTGCACGTCGACGCTCGGCGGCCGCGACTGCGGCTCCTGCGGCTTCTCGCGCACCGAGCGCCGCACG ATGCTGAACGCGGCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MLATGHPHPQAPSPAVVAPQLRRGPLTPRDGASSLKRMAVLDSATRFFGSEAIQDPYPLYERMHAEAPMHRIGDSVFYAV CGWDAVHEAIERVEDFSSNLTATMVFHEDGTVTPFDMGAPGAPMHALATADDPVHAVHRKILLPHLSAKRIRIIEEFATQ TADRLWDENLSDGRIEWMSAIANRLPMMVVCRLLGLPDDDVDKLIRLGYATTTLLDGIVAPEQLEQAGMAAIELSGYVLE HFEKASEKPESSLMADLAARCAAGELEQLPALGIMLTLFSAAGESTASLLGSAAWILADRPAIQRQLRENPELLSTFIEE TLRFEAPFRGHYRHVWRDTTLGGIELPEGAHLLLMWGAANRDPTHFKDPNEFRLDRAAAKSHLSFGKGVHFCVGAALARL EAHIVLRRLLERTSWIDATDVGDWLPSILVRRRERLGLAVR
Sequences:
>Translated_441_residues MLATGHPHPQAPSPAVVAPQLRRGPLTPRDGASSLKRMAVLDSATRFFGSEAIQDPYPLYERMHAEAPMHRIGDSVFYAV CGWDAVHEAIERVEDFSSNLTATMVFHEDGTVTPFDMGAPGAPMHALATADDPVHAVHRKILLPHLSAKRIRIIEEFATQ TADRLWDENLSDGRIEWMSAIANRLPMMVVCRLLGLPDDDVDKLIRLGYATTTLLDGIVAPEQLEQAGMAAIELSGYVLE HFEKASEKPESSLMADLAARCAAGELEQLPALGIMLTLFSAAGESTASLLGSAAWILADRPAIQRQLRENPELLSTFIEE TLRFEAPFRGHYRHVWRDTTLGGIELPEGAHLLLMWGAANRDPTHFKDPNEFRLDRAAAKSHLSFGKGVHFCVGAALARL EAHIVLRRLLERTSWIDATDVGDWLPSILVRRRERLGLAVR >Mature_441_residues MLATGHPHPQAPSPAVVAPQLRRGPLTPRDGASSLKRMAVLDSATRFFGSEAIQDPYPLYERMHAEAPMHRIGDSVFYAV CGWDAVHEAIERVEDFSSNLTATMVFHEDGTVTPFDMGAPGAPMHALATADDPVHAVHRKILLPHLSAKRIRIIEEFATQ TADRLWDENLSDGRIEWMSAIANRLPMMVVCRLLGLPDDDVDKLIRLGYATTTLLDGIVAPEQLEQAGMAAIELSGYVLE HFEKASEKPESSLMADLAARCAAGELEQLPALGIMLTLFSAAGESTASLLGSAAWILADRPAIQRQLRENPELLSTFIEE TLRFEAPFRGHYRHVWRDTTLGGIELPEGAHLLLMWGAANRDPTHFKDPNEFRLDRAAAKSHLSFGKGVHFCVGAALARL EAHIVLRRLLERTSWIDATDVGDWLPSILVRRRERLGLAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI4503211, Length=231, Percent_Identity=25.974025974026, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI21357237, Length=227, Percent_Identity=28.6343612334802, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 48709; Mature: 48709
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATGHPHPQAPSPAVVAPQLRRGPLTPRDGASSLKRMAVLDSATRFFGSEAIQDPYPLY CCCCCCCCCCCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ERMHAEAPMHRIGDSVFYAVCGWDAVHEAIERVEDFSSNLTATMVFHEDGTVTPFDMGAP HHHHHCCHHHHHCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC GAPMHALATADDPVHAVHRKILLPHLSAKRIRIIEEFATQTADRLWDENLSDGRIEWMSA CCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH IANRLPMMVVCRLLGLPDDDVDKLIRLGYATTTLLDGIVAPEQLEQAGMAAIELSGYVLE HHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH HFEKASEKPESSLMADLAARCAAGELEQLPALGIMLTLFSAAGESTASLLGSAAWILADR HHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PAIQRQLRENPELLSTFIEETLRFEAPFRGHYRHVWRDTTLGGIELPEGAHLLLMWGAAN HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCC RDPTHFKDPNEFRLDRAAAKSHLSFGKGVHFCVGAALARLEAHIVLRRLLERTSWIDATD CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VGDWLPSILVRRRERLGLAVR HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLATGHPHPQAPSPAVVAPQLRRGPLTPRDGASSLKRMAVLDSATRFFGSEAIQDPYPLY CCCCCCCCCCCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ERMHAEAPMHRIGDSVFYAVCGWDAVHEAIERVEDFSSNLTATMVFHEDGTVTPFDMGAP HHHHHCCHHHHHCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC GAPMHALATADDPVHAVHRKILLPHLSAKRIRIIEEFATQTADRLWDENLSDGRIEWMSA CCCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH IANRLPMMVVCRLLGLPDDDVDKLIRLGYATTTLLDGIVAPEQLEQAGMAAIELSGYVLE HHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH HFEKASEKPESSLMADLAARCAAGELEQLPALGIMLTLFSAAGESTASLLGSAAWILADR HHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PAIQRQLRENPELLSTFIEETLRFEAPFRGHYRHVWRDTTLGGIELPEGAHLLLMWGAAN HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCC RDPTHFKDPNEFRLDRAAAKSHLSFGKGVHFCVGAALARLEAHIVLRRLLERTSWIDATD CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VGDWLPSILVRRRERLGLAVR HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]