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The map label for this gene is 52843164

Identifier: 52843164

GI number: 52843164

Start: 3359048

End: 3359836

Strand: Reverse

Name: 52843164

Synonym: lpg2970

Alternate gene names: NA

Gene position: 3359836-3359048 (Counterclockwise)

Preceding gene: 52843167

Following gene: 52843163

Centisome position: 98.88

GC content: 35.36

Gene sequence:

>789_bases
TTGGTTTTGTTACTCAAATGCATAGAAAAAATAATTGATGAGTATTTTGCTGTAATTCCCAGGCACACACCGGAATTCGA
AAATATCAACGGTGCGTTAATAATCGCGCATAGAGGAGCTCATAATAATGCAAGAGGGATAATTGAAAACACTCTGGAAG
CATTTCAGAACGCAAAAGAGACCGGATGTTGGGGAATTGAACTGGATGTACACCTCACTAAGGACAAGGTGTTCGTTGTT
AATCATGATCCTACCTTAAATCGATTATGGAACAAGGACATTGCTATTGCTGATCTGAATTTTAGTGAGTTACGGGCATT
GGAGTGCAGAATCCCCTCGCTCTCTGAAGTAGTGAGTCAGTATGGAAATTCCATGCATTTATTTATTGAATTAAAAACAG
CTATTGAGGAGGAAGAGATATTAGTGCAAACCCTGCAACATTTAACGCCATGTAAAGATTTTCATTTATTGACTTTACAG
GAAACTACCTTTAAAAAATTGTGTTCTTTTCCTAGGCAATCTTTATTGCTTGTTGCAGTGCATAATAACGTTAAGAAATT
TTGTGAATTAAGCATCAAGGAGGGGTATGGAGGCGTACTGGGTAATTATTTATTATTGACTAATAGGGCATTAAAATATT
TACAAGATGCCAATCAACATTTTGGCGTGGGATTTGTTGATTCCAAAAACAGTCTGTATAGAGAATTAAATAGAGGGGTT
AAATGGCTCTTTACTAATGAGGCAATAAACATTAATCAGTATTTAAATGACTTAAAAAATAGAATGTAA

Upstream 100 bases:

>100_bases
GTTTCTAGTTTAGTCGATTTTTGTGATTTTGTGCTAATAGCGTATTTTGCCTTTTATTTTATGCCGGCATAAAATGATTA
AAATTGGACTATTAGGATAA

Downstream 100 bases:

>100_bases
TCATTTTGACAATACTCCTGCCTGTTTTTGACAATTCAATAATCATCACATAGTCTTAAATTAACAGTTCGATTTTATCA
TGTAGCAAGGATTAGTACCT

Product: glycerophosphoryl diester phosphodiesterase

Products: alcohol; sn-glycerol 3-phosphate

Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphodiester Phosphodiesterase; Monophosphatase/Phosphodiesterase Bifunctional

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVLLLKCIEKIIDEYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETGCWGIELDVHLTKDKVFVV
NHDPTLNRLWNKDIAIADLNFSELRALECRIPSLSEVVSQYGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQ
ETTFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGV
KWLFTNEAININQYLNDLKNRM

Sequences:

>Translated_262_residues
MVLLLKCIEKIIDEYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETGCWGIELDVHLTKDKVFVV
NHDPTLNRLWNKDIAIADLNFSELRALECRIPSLSEVVSQYGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQ
ETTFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGV
KWLFTNEAININQYLNDLKNRM
>Mature_262_residues
MVLLLKCIEKIIDEYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKETGCWGIELDVHLTKDKVFVV
NHDPTLNRLWNKDIAIADLNFSELRALECRIPSLSEVVSQYGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQ
ETTFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGV
KWLFTNEAININQYLNDLKNRM

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.4.46

Molecular weight: Translated: 30052; Mature: 30052

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLLKCIEKIIDEYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKE
CEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHH
TGCWGIELDVHLTKDKVFVVNHDPTLNRLWNKDIAIADLNFSELRALECRIPSLSEVVSQ
CCCEEEEEEEEEECCEEEEEECCCHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHH
YGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQETTFKKLCSFPRQSLLLVAV
CCCCEEEEEEEEHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCHHEEEEEE
HNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCE
KWLFTNEAININQYLNDLKNRM
EEEEECCCEEHHHHHHHHHHCC
>Mature Secondary Structure
MVLLLKCIEKIIDEYFAVIPRHTPEFENINGALIIAHRGAHNNARGIIENTLEAFQNAKE
CEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHH
TGCWGIELDVHLTKDKVFVVNHDPTLNRLWNKDIAIADLNFSELRALECRIPSLSEVVSQ
CCCEEEEEEEEEECCEEEEEECCCHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHH
YGNSMHLFIELKTAIEEEEILVQTLQHLTPCKDFHLLTLQETTFKKLCSFPRQSLLLVAV
CCCCEEEEEEEEHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCHHEEEEEE
HNNVKKFCELSIKEGYGGVLGNYLLLTNRALKYLQDANQHFGVGFVDSKNSLYRELNRGV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCE
KWLFTNEAININQYLNDLKNRM
EEEEECCCEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerophosphodiester; H2O

Specific reaction: A glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA