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The map label for this gene is yqeZ [H]

Identifier: 52843152

GI number: 52843152

Start: 3346336

End: 3347841

Strand: Reverse

Name: yqeZ [H]

Synonym: lpg2958

Alternate gene names: 52843152

Gene position: 3347841-3346336 (Counterclockwise)

Preceding gene: 52843153

Following gene: 52843151

Centisome position: 98.53

GC content: 39.84

Gene sequence:

>1506_bases
ATGCATCGGGATTGCGTCAGGCAAGAGGGACTGCACAAACTCAATAATTTTTTCTGCAAATTGGCTGTGGTAAAAAGAAT
TTTGCAAGGAATGATATTCAAAAGAAGACTATCTGATTCAGTTCATGAGGATTCAGATTCTGTTGCAACAAAACAATCCC
CAGCCTCAGTAACGTGTGAAAAGGGACTGAGTAAATTAATGCAAACAAGCTGTATTTTTATATTCCTTACCTTGTTCCTT
TTGATTGGATTGCAAACTTCATTTGCAGCAAAAATTGTAGAATTGAATATAAAAGGACCAATTGGGCCTGCTACAGTAGA
TTATATGGAAAGAGGTATTAAAAGCGCTCAAGATGCTGATTTGATAGTGATTTTAATCGATACACCAGGTGGTTTATATG
ATTCAACACGAAATATCATTCAGTTATTTTTACTTTCTGATGTGCCCATAGTGACTTATGTAAGTCCTACTGGAGCAAGG
GCTGCGAGTGCAGGAACTTATTTAATGTATGCGAGTACAATAGCGGCTATGGCACCTGGCACTCAAATGGGGGCTGCAAG
TCCTGTCAGCCTTGGCACAGGATTCAGTGAAGGTGAAAAAGATGAGAAAAAAAAATCAACCATGGAAAATAAGGTAACTC
ATGATGCTGTCGCTACAATAAGGTCACTTGCTCAACTAAGAGGACGCGATCCTGATTTTGCTGAAAAGGCAGTGACAGAA
GGTAAATCCATAACAGCGAATGAAGCCCTCAGCAAGGGAGTGGTCAATTATATTGCAAAAAATAGAGATGATTTATTGTC
TCAAATCCATGGAATAAAAGTCAGTCAAAATAACAAGACAATAACTATTAATACCGAAAGCCCTGACATTCAAGTAATCA
ATCCAGATTGGAGAACCCGCTTTCTATCAGTCATTACCAACCCTACAGTGGCTTATTTATTATTGCTACTTGGAATTTAT
GGAATTTTCTTTGAATTGGTGAATCCAGGTTATGTTTTACCTGGAGTGGTTGGCGCAGTTTCAATGCTTTTTGCGCTGTA
TGCGCTGCAGCTGTTGCCTATAAACTACGCGGGTTTGGGCTTGATTATTTTAGGTATTTTATTTGTCATAGCCGAGGCAT
TTACCCCAAGTTTTGGAGCGTTAGGTGTAGGAGGAACTGTTTCTTTTATTTTGGGTTCCATTATGCTGATGAACACGGAG
CACCTGGCTTTTCAGATAGCGTGGTCAGCAATTTGGGCTATGGCAGTTCTGAATATATTGATTTTTGTTTTGGTTCTGGG
GATGTTAATTAAATCTCGAAACCAAAAAATAAGACATGGCCTGGAAACGTTGGTGGGTGCAAAAGGCAGAGCGTTAGGAG
ACATTAATCTGGAAGGCCAGGCTGTAATTAAGGGAGAGATTTGGAATGTCCATTCAAGCTCGCCCATTGCGGCAAATAAA
AGTGTTAAAGTCACGCGAGCATCAGGATTATTGTTGGAAGTGGAGGAAGATCAGTCGGTTTATTAG

Upstream 100 bases:

>100_bases
AACTCACTTTGATAATACTGAATTGACGTGACCAGCCCCTTTGTTTTTTTCAACCTGTGCTATCTTTTATTTTATAACTA
CCTCTTAAAGGGATGTAAAA

Downstream 100 bases:

>100_bases
TTGGTTATTCCATGTTGAATGAAAGGGATTAAGGAGAATGAGATGGGACCATTTCTGGTTATATTACTGGTAGCGATAGG
CTTGCTACTGGCTTCAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MHRDCVRQEGLHKLNNFFCKLAVVKRILQGMIFKRRLSDSVHEDSDSVATKQSPASVTCEKGLSKLMQTSCIFIFLTLFL
LIGLQTSFAAKIVELNIKGPIGPATVDYMERGIKSAQDADLIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGAR
AASAGTYLMYASTIAAMAPGTQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTRFLSVITNPTVAYLLLLLGIY
GIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLGLIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTE
HLAFQIAWSAIWAMAVLNILIFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
SVKVTRASGLLLEVEEDQSVY

Sequences:

>Translated_501_residues
MHRDCVRQEGLHKLNNFFCKLAVVKRILQGMIFKRRLSDSVHEDSDSVATKQSPASVTCEKGLSKLMQTSCIFIFLTLFL
LIGLQTSFAAKIVELNIKGPIGPATVDYMERGIKSAQDADLIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGAR
AASAGTYLMYASTIAAMAPGTQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTRFLSVITNPTVAYLLLLLGIY
GIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLGLIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTE
HLAFQIAWSAIWAMAVLNILIFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
SVKVTRASGLLLEVEEDQSVY
>Mature_501_residues
MHRDCVRQEGLHKLNNFFCKLAVVKRILQGMIFKRRLSDSVHEDSDSVATKQSPASVTCEKGLSKLMQTSCIFIFLTLFL
LIGLQTSFAAKIVELNIKGPIGPATVDYMERGIKSAQDADLIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGAR
AASAGTYLMYASTIAAMAPGTQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTRFLSVITNPTVAYLLLLLGIY
GIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLGLIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTE
HLAFQIAWSAIWAMAVLNILIFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
SVKVTRASGLLLEVEEDQSVY

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 54134; Mature: 54134

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRDCVRQEGLHKLNNFFCKLAVVKRILQGMIFKRRLSDSVHEDSDSVATKQSPASVTCE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHH
KGLSKLMQTSCIFIFLTLFLLIGLQTSFAAKIVELNIKGPIGPATVDYMERGIKSAQDAD
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCCCC
LIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYLMYASTIAAMAPG
EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHCCC
TQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTR
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCEEEEECCCCCEEEECCHHHHH
FLSVITNPTVAYLLLLLGIYGIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTEHLAFQIAWSAIWAMAVLNIL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCC
SVKVTRASGLLLEVEEDQSVY
CEEEEECCCEEEEECCCCCCC
>Mature Secondary Structure
MHRDCVRQEGLHKLNNFFCKLAVVKRILQGMIFKRRLSDSVHEDSDSVATKQSPASVTCE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHH
KGLSKLMQTSCIFIFLTLFLLIGLQTSFAAKIVELNIKGPIGPATVDYMERGIKSAQDAD
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCCHHHHHHHHHCCCCCCCC
LIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYLMYASTIAAMAPG
EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHCCC
TQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTR
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCEEEEECCCCCEEEECCHHHHH
FLSVITNPTVAYLLLLLGIYGIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTEHLAFQIAWSAIWAMAVLNIL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCC
SVKVTRASGLLLEVEEDQSVY
CEEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]