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The map label for this gene is 52843108

Identifier: 52843108

GI number: 52843108

Start: 3300903

End: 3301193

Strand: Reverse

Name: 52843108

Synonym: lpg2914

Alternate gene names: NA

Gene position: 3301193-3300903 (Counterclockwise)

Preceding gene: 52843109

Following gene: 52843107

Centisome position: 97.16

GC content: 36.43

Gene sequence:

>291_bases
ATGGATAAAAAATTATTTGAACGATTATACGAAAGTATGACTCAGATGAACGAAATTATTGATGGTGAGCGTGTTCCTTC
ACGTGAGTTCGTAGTGGATGCTGTTCATGTAAAAGAAATTAGAAAAAAAACAGGCCTAACCCAAGAAAAATTTTGTCATT
TAATTGATGTAAGTATTGGAACATTAAGAAATTGGGAGCAGGGGAGAAGAGAGCCAACAGGTCCTGCAAAAGCTCTTCTT
CGCGCAATAAATAAAGATCCTGAACATGTATTAGCAGCATTAGCTGGTTGA

Upstream 100 bases:

>100_bases
CACAAATAAGACTCTTACTTATTTATAAAAAAGGTATTCAAGATGATCTGACTACAGATCAAAAGAAAATGTTACGGCAA
TTAAATGAACGGTGGTAATC

Downstream 100 bases:

>100_bases
TAATTGATGTTTTAACTTTCTATAAAAAGTGCAGACAGTGTCGGCACAATTCAAAGTTTCTCTAAAGGAGCTTTTAACTC
AAAATATAGAAAACGAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix XRE Family Protein; MerR Family Regulatory Protein; Cro/CI Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Cro/CI Family Phage Transcriptional Regulator; Helix-Turn-Helix Family Protein; Transcriptional Regulator Protein; Transcriptional Repressor

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MDKKLFERLYESMTQMNEIIDGERVPSREFVVDAVHVKEIRKKTGLTQEKFCHLIDVSIGTLRNWEQGRREPTGPAKALL
RAINKDPEHVLAALAG

Sequences:

>Translated_96_residues
MDKKLFERLYESMTQMNEIIDGERVPSREFVVDAVHVKEIRKKTGLTQEKFCHLIDVSIGTLRNWEQGRREPTGPAKALL
RAINKDPEHVLAALAG
>Mature_96_residues
MDKKLFERLYESMTQMNEIIDGERVPSREFVVDAVHVKEIRKKTGLTQEKFCHLIDVSIGTLRNWEQGRREPTGPAKALL
RAINKDPEHVLAALAG

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10972; Mature: 10972

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKLFERLYESMTQMNEIIDGERVPSREFVVDAVHVKEIRKKTGLTQEKFCHLIDVSIG
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TLRNWEQGRREPTGPAKALLRAINKDPEHVLAALAG
HHHCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MDKKLFERLYESMTQMNEIIDGERVPSREFVVDAVHVKEIRKKTGLTQEKFCHLIDVSIG
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TLRNWEQGRREPTGPAKALLRAINKDPEHVLAALAG
HHHCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA