Click here to switch to the map view.

The map label for this gene is gidA

Identifier: 52843084

GI number: 52843084

Start: 3270853

End: 3272727

Strand: Direct

Name: gidA

Synonym: lpg2889

Alternate gene names: 52843084

Gene position: 3270853-3272727 (Clockwise)

Preceding gene: 52843083

Following gene: 52843085

Centisome position: 96.27

GC content: 44.37

Gene sequence:

>1875_bases
ATGAATCTCGAACAATTATATGATGTCATAGTCGTTGGCGGAGGGCATGCTGGTACAGAAGCAGCGCTTGCAGCAGCACG
CTTGGGTGTAAAAACCTTGTTATTGACCCATAACATAGACTTGCTTGGACAAATGTCCTGCAATCCAGCCATAGGGGGCA
TTGGTAAAGGTCACCTGGTTAAAGAAATTGATGCCCTTGACGGGGCCATGGCTAAAGCCGCCGATCAGGCGGGGATCCAA
TTTCGAATTCTTAATGCCTCAAAAGGACCTGCCGTTCGAGCCACACGCGCACAAGCTGATCGTGTTTTGTATAGAAAAGC
CATTCGCACACAATTGCAATCACAGGCTAACTTAACCATATTTCAACAAGCAGTTGATGATTTGAAAATTGAAGGCGGAT
TAGTCACTGGTGTTGTAACCCAAATGGGGCTCACGCTCAAGGCACGCGCTGTTGTATTAACAGTAGGAACTTTTCTGGGT
GGCAAGATTCATGTCGGTATGAACCAATACGCAGGAGGCAGGGCAGGAGATCCTCCATCCATTGCGTTATCTAAAAGCTT
GCGGGATTTGGATTTACCGGTAGGGCGTTTGAAAACAGGAACTCCTCCTCGAATTGACAGACGCACCATTGATTTTAGCC
AGATGGTGGAACAACCAGGTGATACCCCGGTTCCAGTATTTTCCTATTTGGGAGCGGCAAGCGACCATCCTCAACAAGTA
CCATGCCATATTACCCATACTACAGAAGCCACTCATGACATAATAAGAAATAATTTGGATAAATCGCCAATGTATGCGGG
AGTCATTGAAGGAGTTGGCCCTCGTTATTGCCCCTCGATAGAAGACAAAATTGTTCGCTTTGCTGATAAAACATCTCACC
AGATTTTTGTGGAACCGGAAGGTCTGACAACGGAAGAAATATACCCTAATGGAATTTCTACCAGCCTCCCCTTCGAGGTA
CAAGTGCAATTTGTGCGCACCATTAAAGGTTTTGAAAACGCCCACATCACCAGGCCAGGTTACGCCATCGAGTATGATTA
TTTTGATCCACGCGGATTAACCTCATTTTTGCAAACCAAAGCCATTCCTAATTTGTTTTTTGCCGGGCAAATCAATGGGA
CAACCGGATATGAGGAAGCAGCAGCACAAGGAATTATAGCGGGCATGAATGCGGCATTGCAAATCAAAGATCAAGAGTTA
TGGTGTCCGCGCAGAGATGAGGCCTACATAGGTGTACTTATCGATGATTTGATTACGTGCGGAACGCAAGAGCCCTATAG
AATGTTTACTTCAAGAGCAGAGTATCGTTTGCTATTACGTGAGGATAATGCCGATTTAAGACTAACTGAGAAAGGTCGAC
AGCTTGGCTTGGTAGGTGATGAACGATGGGACAGCTTTTCCAAAAAGCGTGAAGCAATTGAGTCCACTCAAGCTTTGTTA
TACAACAGCTGGGTGAGGGTTCATCATAATGATTTGTTTAAAGAGACTTTGTTTAATCCAATGCAACACGATTGCCGTGC
CGTTGAATTTTTAAAACGACCGGAGATAAATTATCAGCATCTTTTAATGATGGATGATTTGAATTTGCCTGAATTGCCAC
AAGAAATAACAGAGCAAATTGAAATTCAGAATAAATATGCCGGGTACATAGACAGGCAACAACAAGAAATTGAGAAATTA
CGCAAGCATGAAAACACCCTGCTCCCAGAGACTTTGGATTATAATGACGTCGTTGGTTTATCGAGTGAGGTCATTCAAAA
ACTAAACCGGATTAAACCAACTTCCTTGGCTCAAGCCGGGCGGATTTCTGGCGTAACACCTGCCGCGCTGTCTCTTTTAC
TTGTTCATCTGAAAAAGAGTCGGCTTCCAGTATGA

Upstream 100 bases:

>100_bases
AAAGTGTATAATTGCTCATTTTTTTATATGTTAGCTTGGATCTTTTTTGCAGATGGTCCAAAAATCCAATTTATAATTTT
GGCATAACTAATGGTTAAAC

Downstream 100 bases:

>100_bases
TAGATAATACGAAAATAAGATCATTGCTTGAAAAGGGTTTAGCCGAGTTTAAACTCGATTCCATCGGCGACCTCTTGCTT
GATTTTTTGCTCCTGCTCAA

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A [H]

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MNLEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKEIDALDGAMAKAADQAGIQ
FRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQQAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLG
GKIHVGMNQYAGGRAGDPPSIALSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGAASDHPQQV
PCHITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLTTEEIYPNGISTSLPFEV
QVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAIPNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQEL
WCPRRDEAYIGVLIDDLITCGTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALL
YNSWVRVHHNDLFKETLFNPMQHDCRAVEFLKRPEINYQHLLMMDDLNLPELPQEITEQIEIQNKYAGYIDRQQQEIEKL
RKHENTLLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRISGVTPAALSLLLVHLKKSRLPV

Sequences:

>Translated_624_residues
MNLEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKEIDALDGAMAKAADQAGIQ
FRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQQAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLG
GKIHVGMNQYAGGRAGDPPSIALSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGAASDHPQQV
PCHITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLTTEEIYPNGISTSLPFEV
QVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAIPNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQEL
WCPRRDEAYIGVLIDDLITCGTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALL
YNSWVRVHHNDLFKETLFNPMQHDCRAVEFLKRPEINYQHLLMMDDLNLPELPQEITEQIEIQNKYAGYIDRQQQEIEKL
RKHENTLLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRISGVTPAALSLLLVHLKKSRLPV
>Mature_624_residues
MNLEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLVKEIDALDGAMAKAADQAGIQ
FRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTIFQQAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLG
GKIHVGMNQYAGGRAGDPPSIALSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGAASDHPQQV
PCHITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPEGLTTEEIYPNGISTSLPFEV
QVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTKAIPNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQEL
WCPRRDEAYIGVLIDDLITCGTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALL
YNSWVRVHHNDLFKETLFNPMQHDCRAVEFLKRPEINYQHLLMMDDLNLPELPQEITEQIEIQNKYAGYIDRQQQEIEKL
RKHENTLLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAGRISGVTPAALSLLLVHLKKSRLPV

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family [H]

Homologues:

Organism=Homo sapiens, GI74024895, Length=633, Percent_Identity=44.391785150079, Blast_Score=493, Evalue=1e-139,
Organism=Homo sapiens, GI19882217, Length=658, Percent_Identity=42.7051671732523, Blast_Score=479, Evalue=1e-135,
Organism=Homo sapiens, GI183227703, Length=673, Percent_Identity=41.7533432392273, Blast_Score=474, Evalue=1e-133,
Organism=Escherichia coli, GI2367273, Length=615, Percent_Identity=68.4552845528455, Blast_Score=860, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17534255, Length=624, Percent_Identity=40.8653846153846, Blast_Score=472, Evalue=1e-133,
Organism=Saccharomyces cerevisiae, GI6321202, Length=617, Percent_Identity=45.8670988654781, Blast_Score=517, Evalue=1e-147,
Organism=Drosophila melanogaster, GI24658174, Length=639, Percent_Identity=46.4788732394366, Blast_Score=522, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595 [H]

Pfam domain/function: PF01134 GIDA [H]

EC number: NA

Molecular weight: Translated: 69124; Mature: 69124

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLV
CCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCCCHHH
KEIDALDGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTI
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHH
FQQAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPS
HHHHHHHHEECCCHHHHHHHHHCCEEEHEEEEEEEHHHCCCEEEECCCCCCCCCCCCCCC
IALSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGAASDHPQQV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCC
PCHITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPE
CEEEEECCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCC
GLTTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTK
CCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHH
AIPNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITC
CCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHC
GTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALL
CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHH
YNSWVRVHHNDLFKETLFNPMQHDCRAVEFLKRPEINYQHLLMMDDLNLPELPQEITEQI
HHHHHEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHH
EIQNKYAGYIDRQQQEIEKLRKHENTLLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAG
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCC
RISGVTPAALSLLLVHLKKSRLPV
CCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLEQLYDVIVVGGGHAGTEAALAAARLGVKTLLLTHNIDLLGQMSCNPAIGGIGKGHLV
CCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHEEEECCCCCEECCCCCCCCCCCCCCHHH
KEIDALDGAMAKAADQAGIQFRILNASKGPAVRATRAQADRVLYRKAIRTQLQSQANLTI
HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHH
FQQAVDDLKIEGGLVTGVVTQMGLTLKARAVVLTVGTFLGGKIHVGMNQYAGGRAGDPPS
HHHHHHHHEECCCHHHHHHHHHCCEEEHEEEEEEEHHHCCCEEEECCCCCCCCCCCCCCC
IALSKSLRDLDLPVGRLKTGTPPRIDRRTIDFSQMVEQPGDTPVPVFSYLGAASDHPQQV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCC
PCHITHTTEATHDIIRNNLDKSPMYAGVIEGVGPRYCPSIEDKIVRFADKTSHQIFVEPE
CEEEEECCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCC
GLTTEEIYPNGISTSLPFEVQVQFVRTIKGFENAHITRPGYAIEYDYFDPRGLTSFLQTK
CCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHH
AIPNLFFAGQINGTTGYEEAAAQGIIAGMNAALQIKDQELWCPRRDEAYIGVLIDDLITC
CCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHC
GTQEPYRMFTSRAEYRLLLREDNADLRLTEKGRQLGLVGDERWDSFSKKREAIESTQALL
CCCCHHHHHHCCCCEEEEEEECCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHH
YNSWVRVHHNDLFKETLFNPMQHDCRAVEFLKRPEINYQHLLMMDDLNLPELPQEITEQI
HHHHHEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHH
EIQNKYAGYIDRQQQEIEKLRKHENTLLPETLDYNDVVGLSSEVIQKLNRIKPTSLAQAG
HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCC
RISGVTPAALSLLLVHLKKSRLPV
CCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA