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The map label for this gene is ycgB [H]

Identifier: 52843008

GI number: 52843008

Start: 3171260

End: 3172783

Strand: Direct

Name: ycgB [H]

Synonym: lpg2812

Alternate gene names: 52843008

Gene position: 3171260-3172783 (Clockwise)

Preceding gene: 52843007

Following gene: 52843009

Centisome position: 93.33

GC content: 39.11

Gene sequence:

>1524_bases
ATGAGAAAAAAGCCTCTATCAACTGGTGCAGAATGGACTTTCGAGTTAATACAGGCCTATGATCGCGAAATTGCACGCAT
CGCCAAAAGCTTTAATTTGGATACATATCCAAACCAAATTGAAATCATTACCGCTGAACAAATGATGGATGCCTATTCTT
CGGTGGGTATGCCTATCGGTTACCACCATTGGTCTTTTGGAAAACATTTTGTCAGTGTTGAGAAAAGCTACAAAAGAGGA
CAAATGGGCCTGGCCTATGAGCTTGTAATTAATTCCAATCCCTGTATTTCTTATTTAATGGAAGAAAATACCATGGCTAT
GCAAGCCTTGGTTATCGCTCACGCATGCTATGGCCACAATTCTTTTTTTAAGAACAATTACTTATTTAAAATGTGGACTT
CTGCGGATGCTATTATTGACTATCTGGTATTCGCCAAGAAATACATCAGCGATTGTGAGGAACGCTACGGAATAGATGCG
GTAGAACCAGTGCTTGATGCTTGCCATGCCCTTATGAATTACGGGGTTGATCGGTACAAACATCCCACACCCTTATCTAT
CCAGGAAGAAAAAATTCGACAGCAAAACCGTGAAATCTACATGCAATCACAAGTTAATGAGCTATGGAGAACGATACCTT
TCAGTAAGCAAATCGATAAAAACGGACAAAAAAAACGCTTTCCAGAAGAGCCTCAGGAAAATATTCTCTATTTTATAGAA
AAAAATGCCCCTTTATTAGAGCCTTGGCAGAGAGAAATAGTGCGTATAGTAAGAAAACTGGCCCAATATTTTTATCCTCA
GGGACAAACTAAAGTGATGAATGAAGGGTGGGCCTGCTTTTGGCATTATACTATTTTGCATGCTTTGTATGACGAAGGTT
TAGTGACTGATGAATTTATGCTGGAAATACTGCAAAGTCATACCAATGTCATCATGCAACCAGCCTATAATAGCCCTTAT
TACAATGGTATTAATCCATACACCCTTGGCTACCATATGATGCAAGACATCAAACGAATTTGTGAAAACCCAACAGACGA
AGACAAAAAGTGGTTTCCCTATCTCGCGAATACTGATTGGCTCACAAGCCTTGATACGGCGATGCGCAACTACAAAGATG
AAAGTTTTATCGCTCAATACCTGTCACCAAAACTTATACGAGATTTAAAACTGTTCCATATTGTTGATGACGACCGAAAC
TCCGAATTATACATCAATGCCATTCACGACGAATGGGGATATCAGCAAATCAGAGAAGCATTATCCAGACAATACAATCT
GGGTTATCTGGAACCTGATATCCAAGTCTACTCCGTTGATTTGCAAGGAGATCGTTCTTTGACTTTAAGGTACTCCCAAC
AAAACAGAGTACCACTTGGAAGCTCAACAAATGAAGTATTAAAGCACTTGCATTATTTATGGCAATTTCCAGTCATATTA
CAGGCAGTTGATGGGGAAAATAAAATCACCGAGGAATTTAGTTGCCCACCTCTTAATAAAAATAAAACAGCGGAAACTAA
TTGA

Upstream 100 bases:

>100_bases
AACAAGTAAAAGAACGTTATCCTAATTTTGCCATGGAAAATATTGATAATGTTGCTGATATTTATCCGGTATTTCGCGAA
TTATTTAAAAGGAAAACGGT

Downstream 100 bases:

>100_bases
TAGTCTTATATTACTGGCTCAAAATAGCTATTAGTTTTCTATTATAACTAAGGGCCAGTATCTATTCTTTTTCTTCTCCT
TAATTCACTGCCCTTAATAT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIGYHHWSFGKHFVSVEKSYKRG
QMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHNSFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDA
VEPVLDACHALMNYGVDRYKHPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFMLEILQSHTNVIMQPAYNSPY
YNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDWLTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRN
SELYINAIHDEWGYQQIREALSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
QAVDGENKITEEFSCPPLNKNKTAETN

Sequences:

>Translated_507_residues
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIGYHHWSFGKHFVSVEKSYKRG
QMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHNSFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDA
VEPVLDACHALMNYGVDRYKHPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFMLEILQSHTNVIMQPAYNSPY
YNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDWLTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRN
SELYINAIHDEWGYQQIREALSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
QAVDGENKITEEFSCPPLNKNKTAETN
>Mature_507_residues
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIGYHHWSFGKHFVSVEKSYKRG
QMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHNSFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDA
VEPVLDACHALMNYGVDRYKHPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFMLEILQSHTNVIMQPAYNSPY
YNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDWLTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRN
SELYINAIHDEWGYQQIREALSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
QAVDGENKITEEFSCPPLNKNKTAETN

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=496, Percent_Identity=65.5241935483871, Blast_Score=710, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59674; Mature: 59674

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCC
YHHWSFGKHFVSVEKSYKRGQMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHN
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
SFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDAVEPVLDACHALMNYGVDRYK
CHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCC
HPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHH
LEILQSHTNVIMQPAYNSPYYNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDW
HHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
LTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRNSELYINAIHDEWGYQQIREA
HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHH
LSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
HHHCCCCCEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QAVDGENKITEEFSCPPLNKNKTAETN
EEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKKPLSTGAEWTFELIQAYDREIARIAKSFNLDTYPNQIEIITAEQMMDAYSSVGMPIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHCCCCCC
YHHWSFGKHFVSVEKSYKRGQMGLAYELVINSNPCISYLMEENTMAMQALVIAHACYGHN
CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
SFFKNNYLFKMWTSADAIIDYLVFAKKYISDCEERYGIDAVEPVLDACHALMNYGVDRYK
CHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCC
HPTPLSIQEEKIRQQNREIYMQSQVNELWRTIPFSKQIDKNGQKKRFPEEPQENILYFIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEE
KNAPLLEPWQREIVRIVRKLAQYFYPQGQTKVMNEGWACFWHYTILHALYDEGLVTDEFM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHH
LEILQSHTNVIMQPAYNSPYYNGINPYTLGYHMMQDIKRICENPTDEDKKWFPYLANTDW
HHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
LTSLDTAMRNYKDESFIAQYLSPKLIRDLKLFHIVDDDRNSELYINAIHDEWGYQQIREA
HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEEEEECCCCCCEEEEEEECCCCCHHHHHHH
LSRQYNLGYLEPDIQVYSVDLQGDRSLTLRYSQQNRVPLGSSTNEVLKHLHYLWQFPVIL
HHHCCCCCEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QAVDGENKITEEFSCPPLNKNKTAETN
EEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]