Click here to switch to the map view.

The map label for this gene is 52842960

Identifier: 52842960

GI number: 52842960

Start: 3111771

End: 3112433

Strand: Reverse

Name: 52842960

Synonym: lpg2761

Alternate gene names: NA

Gene position: 3112433-3111771 (Counterclockwise)

Preceding gene: 52842961

Following gene: 52842958

Centisome position: 91.6

GC content: 33.03

Gene sequence:

>663_bases
TTGCAACATATGGAGAGTGTAATGAAAGAGCAATTTTTTCAGACAAAAGATTTAAATACTTTGCTTCGATCTGTTGAAAA
ACCAATTCAGGATTTGTTAGAACTCAATTTTAAAACATTAAAAACTGTGTCTTATGTTACTCCTATTGAATTATTCAATG
TTTTAAAACCAGAAGAAGTCCTGGAAAAAAATATGAATGTATTCATTCAAAATAGTCAAAAAGCAATGAGTTACATGTTG
AACGTATTTCAAATAATGGAACATCATTGGATTAATATCTATGATCAGATGGCCGAAAACCCAAATGAAAAGAAGGCTAA
TCCAGCAATAGACAAGGCAAATCGCAAAGTAGATACCAGTACTCCAAAATCATCAGCCAGTAAAAAAGCCGTTACAGCAA
AAGGTAAAACAAAGCCTGCTGCAGTACAGTCAAAAGCAAAAACAAGCAAAGCGAAACCGAAAATCAGCAGTCCAATAAAA
GTTAAAACAAATACTCAAGAGCGGCCTGCAGCTGTCAAACAACAATCGCAAATGCCCTTATCTTCTTTGCAGAAAGATAT
GGAAAAACAAGGTATTAATACGCCTGTTGCATTGAAAAACTCAGTTGCGATATTAAAAAATGAAACAAAGGATATAGTGC
CTTCTAATAACAAACTTAAATAA

Upstream 100 bases:

>100_bases
AAGGAGGCCAGTTAGCGATGGGACTGGTTTATGGAGTTACAAGAAAATGGCATTTAATATTTGACAAATTATTTTTTTAA
GCTAATCTTGTTTTTGTGCA

Downstream 100 bases:

>100_bases
ACTGGTGCTTTATCCTGTTTTCGTTTTGAGCGCTTTTTTGAGAAGTAGCAAACGATACTTGATAAATCCGGGATACCCAA
AAGCTAGACATGATAGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQHMESVMKEQFFQTKDLNTLLRSVEKPIQDLLELNFKTLKTVSYVTPIELFNVLKPEEVLEKNMNVFIQNSQKAMSYML
NVFQIMEHHWINIYDQMAENPNEKKANPAIDKANRKVDTSTPKSSASKKAVTAKGKTKPAAVQSKAKTSKAKPKISSPIK
VKTNTQERPAAVKQQSQMPLSSLQKDMEKQGINTPVALKNSVAILKNETKDIVPSNNKLK

Sequences:

>Translated_220_residues
MQHMESVMKEQFFQTKDLNTLLRSVEKPIQDLLELNFKTLKTVSYVTPIELFNVLKPEEVLEKNMNVFIQNSQKAMSYML
NVFQIMEHHWINIYDQMAENPNEKKANPAIDKANRKVDTSTPKSSASKKAVTAKGKTKPAAVQSKAKTSKAKPKISSPIK
VKTNTQERPAAVKQQSQMPLSSLQKDMEKQGINTPVALKNSVAILKNETKDIVPSNNKLK
>Mature_220_residues
MQHMESVMKEQFFQTKDLNTLLRSVEKPIQDLLELNFKTLKTVSYVTPIELFNVLKPEEVLEKNMNVFIQNSQKAMSYML
NVFQIMEHHWINIYDQMAENPNEKKANPAIDKANRKVDTSTPKSSASKKAVTAKGKTKPAAVQSKAKTSKAKPKISSPIK
VKTNTQERPAAVKQQSQMPLSSLQKDMEKQGINTPVALKNSVAILKNETKDIVPSNNKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24839; Mature: 24839

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHMESVMKEQFFQTKDLNTLLRSVEKPIQDLLELNFKTLKTVSYVTPIELFNVLKPEEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH
LEKNMNVFIQNSQKAMSYMLNVFQIMEHHWINIYDQMAENPNEKKANPAIDKANRKVDTS
HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC
TPKSSASKKAVTAKGKTKPAAVQSKAKTSKAKPKISSPIKVKTNTQERPAAVKQQSQMPL
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHCCCH
SSLQKDMEKQGINTPVALKNSVAILKNETKDIVPSNNKLK
HHHHHHHHHCCCCCCHHHCCCHHHHHCCCHHCCCCCCCCC
>Mature Secondary Structure
MQHMESVMKEQFFQTKDLNTLLRSVEKPIQDLLELNFKTLKTVSYVTPIELFNVLKPEEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH
LEKNMNVFIQNSQKAMSYMLNVFQIMEHHWINIYDQMAENPNEKKANPAIDKANRKVDTS
HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCC
TPKSSASKKAVTAKGKTKPAAVQSKAKTSKAKPKISSPIKVKTNTQERPAAVKQQSQMPL
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHCCCH
SSLQKDMEKQGINTPVALKNSVAILKNETKDIVPSNNKLK
HHHHHHHHHCCCCCCHHHCCCHHHHHCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA