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The map label for this gene is recR

Identifier: 52842955

GI number: 52842955

Start: 3105451

End: 3106050

Strand: Direct

Name: recR

Synonym: lpg2756

Alternate gene names: 52842955

Gene position: 3105451-3106050 (Clockwise)

Preceding gene: 52842954

Following gene: 52842956

Centisome position: 91.4

GC content: 41.33

Gene sequence:

>600_bases
CTGACTATGGATGCTCTAAGCCGATTGGTAGAGGCGCTTCGCTGTCTTCCCGGTGTGGGACCAAAATCAGCACAAAGGAT
GGTGTTCCATTTATTGCAGCACCAAAGGCAGCGAGGTTTACACCTTGCCTCCTGTTTAGAACAGGCAATGAAGCACATTA
GTCATTGTCAGCAGTGTAATAATTACACCGAACAAACACTGTGTGCTCTTTGTCAAAATCCTAATCGAGATTCGACATTG
CTTTGTGTGGTAGAGAGTCCAGCAGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAGTATTTTGTCCTTAT
GGGAAAAATTTCTCCTCTTGATGGCTTGGGACCTGATGACATAGGTCTACCGAAACTTAAGGAGTTAATTACTAGGGAAA
AAATTCAGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAG
GATGAAACCGTCAATATCAGTCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTAT
AAGCAGTGCCCTTAAGAACAGAGCTGTGATTAATGTCTAA

Upstream 100 bases:

>100_bases
TGCGTAAAATTGAAAAAGCATCCAAAGAAAAAATCAGCCAACTGACTGCTGGACTTAATATTCCAACTGATTTAATGGGT
GATAAAGAAGGAGAGTAACC

Downstream 100 bases:

>100_bases
ATCCATATTTATTTTATGCAGAAAAAAAATACTGGTCTTACTCCTGTTATCCTTATGTTTCATAACAAGTACAGCTTCTG
CTTCCTTCTACAGAAGTTTA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCALCQNPNRDSTL
LCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLK
DETVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV

Sequences:

>Translated_199_residues
MTMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCALCQNPNRDSTL
LCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLK
DETVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV
>Mature_198_residues
TMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCALCQNPNRDSTLL
CVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKD
ETVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=190, Percent_Identity=55.7894736842105, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_LEGPH (Q5ZRX0)

Other databases:

- EMBL:   AE017354
- RefSeq:   YP_096754.1
- ProteinModelPortal:   Q5ZRX0
- SMR:   Q5ZRX0
- STRING:   Q5ZRX0
- GeneID:   3079610
- GenomeReviews:   AE017354_GR
- KEGG:   lpn:lpg2756
- NMPDR:   fig|272624.3.peg.2699
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   LPNE272624:LPG2756-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21896; Mature: 21764

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCN
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
NYTEQTLCALCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDD
CHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCC
IGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELE
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEE
FLDGNTISSALKNRAVINV
EECCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCN
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
NYTEQTLCALCQNPNRDSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDD
CHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCC
IGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELE
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEE
FLDGNTISSALKNRAVINV
EECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA