Click here to switch to the map view.

The map label for this gene is 52842872

Identifier: 52842872

GI number: 52842872

Start: 3013221

End: 3014102

Strand: Direct

Name: 52842872

Synonym: lpg2666

Alternate gene names: NA

Gene position: 3013221-3014102 (Clockwise)

Preceding gene: 52842869

Following gene: 52842877

Centisome position: 88.68

GC content: 39.0

Gene sequence:

>882_bases
GTGAGGAATGTTGCCATGATGACTGATTCGTTAATACACATAAGGGATTTGTTACATGCTCAATTTTGCTACCAAATGTT
TATTACTCCCATTCATCTTCCTATCGATAAAAAATACAGGGAATTTGCCAAAATGGCCTGTGAATTCATAGAAGGAAGAC
GGGATGAAATCATACACAGAGAATATCCTCGTCATCATGTTTTACATCGTTTTACTCCCGCGAGCAAACCAAATGGAAAA
AAAATATTGATTACGCATGGCTGGATGTCTCGTGCTGCTTATATGGTTCGCTTAATCAGGCTTCTTCATAAAGAAGGATA
TGAAGTCTATGCTATCGATTTTCCTGCCCATGGCGAAGCTAAAGGAATTCAGCTTCCCTGGACTGATGCCATTGCTATTA
TCAAAGAAACGATTAACCAATTTGGGCCTTTTTATGGATTGGTTGGCCATTCTTTTGGTGGTTCAATGATTTTAAATACT
TTGAATCTGGCAGGCCAACTACCGGAATGGCAATTAAATCACAAGCCGGAAAGAGCCATTTTAATTGCATCGCCAACACA
AATGCGAACTCCTGTCAATAAAATTGCCAGACGTTTTAAATTAAGCGGGCAAGCCTATTTACAACTTCGCCAATTAATCC
GTCAACAAGCATCGGTAGATCCTGAGAGAATTCGTTTAAGTCATTTTATTTCCCAAGCCCCTGATACCTATTTTCTATGT
ATCCATGGAGAATTGGATGCCACTATCAACCCCAAAGAATCGATAAATTTTTGCAAATATTACAAAAATGCCCGCCTGTC
TCTTTTACCAGACGCTGATCATGTGAGTGTATTAATGGATGAGCGCGTCGAACAAATCGCTTTGGATTTTTTAAATCGTT
AA

Upstream 100 bases:

>100_bases
TGCATGTTTCGCCAAAACATGAGTCCATGAGTCAGTAAATATCAATATGTCCACTAATTAACTCAAATTATGGATTTGGT
CTAAAATAAAAATAAATTAT

Downstream 100 bases:

>100_bases
TATGACAGGGGGGGTTGATCCACCTGGATTACGGTTTTACCTAATCCAGGTGGATCCAGTAGCTAGGCAGACCATTGTGT
TTGCTGAAACAATGAGTTTC

Product: hydrolase

Products: NA

Alternate protein names: Hydrolase Protein

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRNVAMMTDSLIHIRDLLHAQFCYQMFITPIHLPIDKKYREFAKMACEFIEGRRDEIIHREYPRHHVLHRFTPASKPNGK
KILITHGWMSRAAYMVRLIRLLHKEGYEVYAIDFPAHGEAKGIQLPWTDAIAIIKETINQFGPFYGLVGHSFGGSMILNT
LNLAGQLPEWQLNHKPERAILIASPTQMRTPVNKIARRFKLSGQAYLQLRQLIRQQASVDPERIRLSHFISQAPDTYFLC
IHGELDATINPKESINFCKYYKNARLSLLPDADHVSVLMDERVEQIALDFLNR

Sequences:

>Translated_293_residues
MRNVAMMTDSLIHIRDLLHAQFCYQMFITPIHLPIDKKYREFAKMACEFIEGRRDEIIHREYPRHHVLHRFTPASKPNGK
KILITHGWMSRAAYMVRLIRLLHKEGYEVYAIDFPAHGEAKGIQLPWTDAIAIIKETINQFGPFYGLVGHSFGGSMILNT
LNLAGQLPEWQLNHKPERAILIASPTQMRTPVNKIARRFKLSGQAYLQLRQLIRQQASVDPERIRLSHFISQAPDTYFLC
IHGELDATINPKESINFCKYYKNARLSLLPDADHVSVLMDERVEQIALDFLNR
>Mature_293_residues
MRNVAMMTDSLIHIRDLLHAQFCYQMFITPIHLPIDKKYREFAKMACEFIEGRRDEIIHREYPRHHVLHRFTPASKPNGK
KILITHGWMSRAAYMVRLIRLLHKEGYEVYAIDFPAHGEAKGIQLPWTDAIAIIKETINQFGPFYGLVGHSFGGSMILNT
LNLAGQLPEWQLNHKPERAILIASPTQMRTPVNKIARRFKLSGQAYLQLRQLIRQQASVDPERIRLSHFISQAPDTYFLC
IHGELDATINPKESINFCKYYKNARLSLLPDADHVSVLMDERVEQIALDFLNR

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33970; Mature: 33970

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVAMMTDSLIHIRDLLHAQFCYQMFITPIHLPIDKKYREFAKMACEFIEGRRDEIIHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
EYPRHHVLHRFTPASKPNGKKILITHGWMSRAAYMVRLIRLLHKEGYEVYAIDFPAHGEA
CCCHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
KGIQLPWTDAIAIIKETINQFGPFYGLVGHSFGGSMILNTLNLAGQLPEWQLNHKPERAI
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE
LIASPTQMRTPVNKIARRFKLSGQAYLQLRQLIRQQASVDPERIRLSHFISQAPDTYFLC
EEECCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE
IHGELDATINPKESINFCKYYKNARLSLLPDADHVSVLMDERVEQIALDFLNR
EECCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNVAMMTDSLIHIRDLLHAQFCYQMFITPIHLPIDKKYREFAKMACEFIEGRRDEIIHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
EYPRHHVLHRFTPASKPNGKKILITHGWMSRAAYMVRLIRLLHKEGYEVYAIDFPAHGEA
CCCHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
KGIQLPWTDAIAIIKETINQFGPFYGLVGHSFGGSMILNTLNLAGQLPEWQLNHKPERAI
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE
LIASPTQMRTPVNKIARRFKLSGQAYLQLRQLIRQQASVDPERIRLSHFISQAPDTYFLC
EEECCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE
IHGELDATINPKESINFCKYYKNARLSLLPDADHVSVLMDERVEQIALDFLNR
EECCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA