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The map label for this gene is 52842802

Identifier: 52842802

GI number: 52842802

Start: 2928906

End: 2929943

Strand: Direct

Name: 52842802

Synonym: lpg2596

Alternate gene names: NA

Gene position: 2928906-2929943 (Clockwise)

Preceding gene: 52842793

Following gene: 52842803

Centisome position: 86.2

GC content: 43.55

Gene sequence:

>1038_bases
ATGAGATATTGTCTCCTCATTTTCTGTTTCATTATATCATCCATTACTCATGCCTTAAGCCTAAGACCGGATTCCCCCTC
TCGTTATGTTGTGCAACCCGGAGACACCTTATGGAGTATCTCCAGCCGTTTTTTGAATAACCCCTGGGAATGGAAAGCGT
TATGGCGCGCAAACCCCCAGATTAAAAATCCCGACAGGTTATATCCTGGTGCCGTTCTCGCTTTAGAGTATTATCAAAAC
ATTCCCTATCTCAGGGTTCTGTCTAACGGAACAATCAAACTTTCCCCCAATATAAGAGTGACACCCCAGGAAGACGCCGT
TCCACCAATACCATTAGGCGATATCAAACCTTTTTTGGATGAATCGTTAATTCTGGATGTTAATGTCCTAAACCGAGCAC
CGTATGTGGTAGCACTCATGAGTGAGCGGATGCTTGGAGGCCAGGGAGATGAAATTTATGTCAGAGGCTTGCATCCCTCC
AAAGAAATGCCTCAAGGAGGCACTATAGGATACTCCATCTTCAGGGGAGGGAGAAATTATTTTGATCCAATAACCCATGA
ATTGTTAGGCTATAAAGCAGTTTTGGTCGGTTATGGAGAATTGGTTGCTGGCGGCGAGCCCGCTACGGTTTTATTGACCA
GTATTAATCAGGGCATCAAAATCAATGATAAGGTATTGATTAATAACCACCCTGAATTTGAATTGTATTTCGAACCCGAA
ACCCCTGCCAGGCAAGTCAGAGGATACATTATTGAAATGCCTGACAATATGCCTGTTGGAAATACACAAGAGGCTGTTGG
AGGAGTCATCATCATTAATCTTGGAGAAACCTCCGGGATAAAACCGGGAGATGTTTTGGCTATCTATGGCAAGGAACGTA
TTGTCAATGATCCCCAAAATCATCTCAGACCTATTACCTTACCGCAAGAACGTCTTGGCGAAGCTATGGTGTTTCGTGTG
TTTACAAAAGCAAGTTATGCCCTGATAGTAAGGTCCACGCGTGCTATTCATTTATTAGATACAGTAACGAACCCATGA

Upstream 100 bases:

>100_bases
TTGCCATTGTTTATCTAGTTCTCCACACGTTAATCGTGATATTATCCCCGATATACAGTAATGCTGCAAGATGCTAAGGC
TCAACTAAAGGGATTGATAC

Downstream 100 bases:

>100_bases
ATAATCTGCAACCCCTCCTCGCCTTAAACAGGATGAAAAAAATTGGCCCCCGAACCGTATTAAAACTGCAAAAAAGATGG
CCTGATTTAAACCTTATGTT

Product: signal peptide protein

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRYCLLIFCFIISSITHALSLRPDSPSRYVVQPGDTLWSISSRFLNNPWEWKALWRANPQIKNPDRLYPGAVLALEYYQN
IPYLRVLSNGTIKLSPNIRVTPQEDAVPPIPLGDIKPFLDESLILDVNVLNRAPYVVALMSERMLGGQGDEIYVRGLHPS
KEMPQGGTIGYSIFRGGRNYFDPITHELLGYKAVLVGYGELVAGGEPATVLLTSINQGIKINDKVLINNHPEFELYFEPE
TPARQVRGYIIEMPDNMPVGNTQEAVGGVIIINLGETSGIKPGDVLAIYGKERIVNDPQNHLRPITLPQERLGEAMVFRV
FTKASYALIVRSTRAIHLLDTVTNP

Sequences:

>Translated_345_residues
MRYCLLIFCFIISSITHALSLRPDSPSRYVVQPGDTLWSISSRFLNNPWEWKALWRANPQIKNPDRLYPGAVLALEYYQN
IPYLRVLSNGTIKLSPNIRVTPQEDAVPPIPLGDIKPFLDESLILDVNVLNRAPYVVALMSERMLGGQGDEIYVRGLHPS
KEMPQGGTIGYSIFRGGRNYFDPITHELLGYKAVLVGYGELVAGGEPATVLLTSINQGIKINDKVLINNHPEFELYFEPE
TPARQVRGYIIEMPDNMPVGNTQEAVGGVIIINLGETSGIKPGDVLAIYGKERIVNDPQNHLRPITLPQERLGEAMVFRV
FTKASYALIVRSTRAIHLLDTVTNP
>Mature_345_residues
MRYCLLIFCFIISSITHALSLRPDSPSRYVVQPGDTLWSISSRFLNNPWEWKALWRANPQIKNPDRLYPGAVLALEYYQN
IPYLRVLSNGTIKLSPNIRVTPQEDAVPPIPLGDIKPFLDESLILDVNVLNRAPYVVALMSERMLGGQGDEIYVRGLHPS
KEMPQGGTIGYSIFRGGRNYFDPITHELLGYKAVLVGYGELVAGGEPATVLLTSINQGIKINDKVLINNHPEFELYFEPE
TPARQVRGYIIEMPDNMPVGNTQEAVGGVIIINLGETSGIKPGDVLAIYGKERIVNDPQNHLRPITLPQERLGEAMVFRV
FTKASYALIVRSTRAIHLLDTVTNP

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38519; Mature: 38519

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYCLLIFCFIISSITHALSLRPDSPSRYVVQPGDTLWSISSRFLNNPWEWKALWRANPQ
CHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCC
IKNPDRLYPGAVLALEYYQNIPYLRVLSNGTIKLSPNIRVTPQEDAVPPIPLGDIKPFLD
CCCCCCCCCCCEEEEHHHHCCCEEEEECCCEEEECCCEEECCCCCCCCCCCCCCCCHHHC
ESLILDVNVLNRAPYVVALMSERMLGGQGDEIYVRGLHPSKEMPQGGTIGYSIFRGGRNY
CCEEEEEEECCCCCEEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCC
FDPITHELLGYKAVLVGYGELVAGGEPATVLLTSINQGIKINDKVLINNHPEFELYFEPE
CCHHHHHHHCCEEEEEECCHHCCCCCCCEEEEEECCCCEEECCEEEECCCCCEEEEECCC
TPARQVRGYIIEMPDNMPVGNTQEAVGGVIIINLGETSGIKPGDVLAIYGKERIVNDPQN
CCHHHHCEEEEECCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHH
HLRPITLPQERLGEAMVFRVFTKASYALIVRSTRAIHLLDTVTNP
HCCCCCCCHHHHCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCC
>Mature Secondary Structure
MRYCLLIFCFIISSITHALSLRPDSPSRYVVQPGDTLWSISSRFLNNPWEWKALWRANPQ
CHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCC
IKNPDRLYPGAVLALEYYQNIPYLRVLSNGTIKLSPNIRVTPQEDAVPPIPLGDIKPFLD
CCCCCCCCCCCEEEEHHHHCCCEEEEECCCEEEECCCEEECCCCCCCCCCCCCCCCHHHC
ESLILDVNVLNRAPYVVALMSERMLGGQGDEIYVRGLHPSKEMPQGGTIGYSIFRGGRNY
CCEEEEEEECCCCCEEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCC
FDPITHELLGYKAVLVGYGELVAGGEPATVLLTSINQGIKINDKVLINNHPEFELYFEPE
CCHHHHHHHCCEEEEEECCHHCCCCCCCEEEEEECCCCEEECCEEEECCCCCEEEEECCC
TPARQVRGYIIEMPDNMPVGNTQEAVGGVIIINLGETSGIKPGDVLAIYGKERIVNDPQN
CCHHHHCEEEEECCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHH
HLRPITLPQERLGEAMVFRVFTKASYALIVRSTRAIHLLDTVTNP
HCCCCCCCHHHHCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA