Click here to switch to the map view.

The map label for this gene is 52842788

Identifier: 52842788

GI number: 52842788

Start: 2911432

End: 2912598

Strand: Direct

Name: 52842788

Synonym: lpg2582

Alternate gene names: NA

Gene position: 2911432-2912598 (Clockwise)

Preceding gene: 52842774

Following gene: 52842789

Centisome position: 85.69

GC content: 39.07

Gene sequence:

>1167_bases
ATGTCGGTCGAGATGAGCAAAACCTCCAGTGCCAGATTCCCTCCTGGACAAGAAATCAAATTAGCAAAACCGGCGACAGA
ACTTTATATAGGACAAATTCTGAAAACGGTTGTTGTCACAACTCTGTCTAATGATCAGGTTCTTATCAATATCAATGGGC
AAAATCTCAACGCAAAAGCATCTCATCATTTTACACCGGGAGAGTTATTTGAAGTAAAAGTCATAGCGAACCACCCCGAA
ACCATCCTTGAAGTGCAACAAAAAACACCGCTTCCATCTCTATTGCAAAATGCGTTACTTCAGTATTTACCAAAACAAGC
ACCAGCTACCAATCTTTTACAGACACTGACTCAATTGATGGCAGAGAATAATTTATCGGCTCCCATCAATCAGGTTATGA
AAACCATTTTAGGCAACGTCCCTGTTTTGACTCAATTACCTAATCAACTTATGCAAGCGATTAGTCAAAGTGGTGTTTTC
TTAGAATCCAAATTGTTAAAAGGAAAGATACCCCGAGAAATACAATCGGATTTTAAAGGGTTGTGTTTTAAATTATTACA
CCGTTTAGGCACAGACAGTAAACTCCCAATCAATCTGCCGAACGAATTGGAATCAGGTTTTCTTCAGCAAGCAGCCCTTC
CTTTACCAGGAGCTATCCCTCAGCCACTGGCTAAAGACACGATATTGAATCTTATTGGACTATCAACAGAGGCGGTACAC
CATATTTTACGTGAGCAGGTAACACAGGCATTAGCGCGAATCACGACAAATCAAATTAATTATTTATCGCAGGAGAATCA
AGAAGCTTATCTAATCATGCTTGATTTTCCTTTAAAAACCCCCGATGGCATTGATGTAATCCCTATTATGATCAAACAAC
ACAAGGCAGAACCTATGCAACTGTCTAAATGGTCAATATCGTTCGCTTTGAATTTATCCCATTTAGGAAGCATACAAGCT
ACGGTTTCGATTTACGCTAAAAACATCGATATCAAGGTTAATACTCAGCAATCGTCAACATTGCAACTCCTCAATGATTA
CCATAAGGATTTGGAAGAAACGCTCTATGAATCGGGTCTTCACTTAAGAGAATGGAAGCTGCAAGTTGGGTTGGAAGAAA
ATCATATCGATGCCACAAACCTTCGTTTATTGGATATAAAAATATGA

Upstream 100 bases:

>100_bases
AATTAAGACGATGAGTATATACTTATTAGACAACTTACGAAACAGTCCAGTGGGGGACGACGATAAGAAAAAGCAGTCTA
ACTGATGATAAGGATGGTGT

Downstream 100 bases:

>100_bases
AAAGAAAGAAACCCGTCGCTGTTGCATTACGTTATGATGGCAATTCTCCTCCCAAAGTAACCGCTAAAGGAGAAGGTTTA
TTTGCTCAGCAAATTATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSVEMSKTSSARFPPGQEIKLAKPATELYIGQILKTVVVTTLSNDQVLININGQNLNAKASHHFTPGELFEVKVIANHPE
TILEVQQKTPLPSLLQNALLQYLPKQAPATNLLQTLTQLMAENNLSAPINQVMKTILGNVPVLTQLPNQLMQAISQSGVF
LESKLLKGKIPREIQSDFKGLCFKLLHRLGTDSKLPINLPNELESGFLQQAALPLPGAIPQPLAKDTILNLIGLSTEAVH
HILREQVTQALARITTNQINYLSQENQEAYLIMLDFPLKTPDGIDVIPIMIKQHKAEPMQLSKWSISFALNLSHLGSIQA
TVSIYAKNIDIKVNTQQSSTLQLLNDYHKDLEETLYESGLHLREWKLQVGLEENHIDATNLRLLDIKI

Sequences:

>Translated_388_residues
MSVEMSKTSSARFPPGQEIKLAKPATELYIGQILKTVVVTTLSNDQVLININGQNLNAKASHHFTPGELFEVKVIANHPE
TILEVQQKTPLPSLLQNALLQYLPKQAPATNLLQTLTQLMAENNLSAPINQVMKTILGNVPVLTQLPNQLMQAISQSGVF
LESKLLKGKIPREIQSDFKGLCFKLLHRLGTDSKLPINLPNELESGFLQQAALPLPGAIPQPLAKDTILNLIGLSTEAVH
HILREQVTQALARITTNQINYLSQENQEAYLIMLDFPLKTPDGIDVIPIMIKQHKAEPMQLSKWSISFALNLSHLGSIQA
TVSIYAKNIDIKVNTQQSSTLQLLNDYHKDLEETLYESGLHLREWKLQVGLEENHIDATNLRLLDIKI
>Mature_387_residues
SVEMSKTSSARFPPGQEIKLAKPATELYIGQILKTVVVTTLSNDQVLININGQNLNAKASHHFTPGELFEVKVIANHPET
ILEVQQKTPLPSLLQNALLQYLPKQAPATNLLQTLTQLMAENNLSAPINQVMKTILGNVPVLTQLPNQLMQAISQSGVFL
ESKLLKGKIPREIQSDFKGLCFKLLHRLGTDSKLPINLPNELESGFLQQAALPLPGAIPQPLAKDTILNLIGLSTEAVHH
ILREQVTQALARITTNQINYLSQENQEAYLIMLDFPLKTPDGIDVIPIMIKQHKAEPMQLSKWSISFALNLSHLGSIQAT
VSIYAKNIDIKVNTQQSSTLQLLNDYHKDLEETLYESGLHLREWKLQVGLEENHIDATNLRLLDIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43170; Mature: 43039

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEMSKTSSARFPPGQEIKLAKPATELYIGQILKTVVVTTLSNDQVLININGQNLNAKA
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCC
SHHFTPGELFEVKVIANHPETILEVQQKTPLPSLLQNALLQYLPKQAPATNLLQTLTQLM
CCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AENNLSAPINQVMKTILGNVPVLTQLPNQLMQAISQSGVFLESKLLKGKIPREIQSDFKG
HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCHHHHHHHHH
LCFKLLHRLGTDSKLPINLPNELESGFLQQAALPLPGAIPQPLAKDTILNLIGLSTEAVH
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
HILREQVTQALARITTNQINYLSQENQEAYLIMLDFPLKTPDGIDVIPIMIKQHKAEPMQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCE
LSKWSISFALNLSHLGSIQATVSIYAKNIDIKVNTQQSSTLQLLNDYHKDLEETLYESGL
EEEEEEEEEEEHHHHCCHHEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
HLREWKLQVGLEENHIDATNLRLLDIKI
CEEEEEEEECCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
SVEMSKTSSARFPPGQEIKLAKPATELYIGQILKTVVVTTLSNDQVLININGQNLNAKA
CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCC
SHHFTPGELFEVKVIANHPETILEVQQKTPLPSLLQNALLQYLPKQAPATNLLQTLTQLM
CCCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AENNLSAPINQVMKTILGNVPVLTQLPNQLMQAISQSGVFLESKLLKGKIPREIQSDFKG
HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCHHHHHHHHH
LCFKLLHRLGTDSKLPINLPNELESGFLQQAALPLPGAIPQPLAKDTILNLIGLSTEAVH
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
HILREQVTQALARITTNQINYLSQENQEAYLIMLDFPLKTPDGIDVIPIMIKQHKAEPMQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCE
LSKWSISFALNLSHLGSIQATVSIYAKNIDIKVNTQQSSTLQLLNDYHKDLEETLYESGL
EEEEEEEEEEEHHHHCCHHEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
HLREWKLQVGLEENHIDATNLRLLDIKI
CEEEEEEEECCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA