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The map label for this gene is intZ [C]

Identifier: 52842766

GI number: 52842766

Start: 2892417

End: 2892845

Strand: Direct

Name: intZ [C]

Synonym: lpg2558

Alternate gene names: 52842766

Gene position: 2892417-2892845 (Clockwise)

Preceding gene: 52842764

Following gene: 52842767

Centisome position: 85.13

GC content: 37.76

Gene sequence:

>429_bases
ATGAAAATTCATTTAACGCCACTCACTCAATCTTTATTTGAATTATTAAAAGCTGAAACCAATTCTTCTTTTGTCATACC
AGGGCTTAATGATGAAGAACCCTTAACCGATAAGGCTATTGCGAAAGCAGTTAGCAGAATTCAAACTCGAGTTGGCATTC
CTCATTGGACAGCCCATGATCTAAGACGCACCTTTGCAACCCAACTTGGAGAGGCTTTGCATGTTGATCCGGTGGTAATT
GAGAAATGTTTAGGGCATAAGATGCCTAAGATCATGGCTACTTACAATAAGAATGAAATGCTACCTCAAAGAAAAGAAGC
TCTTATTCGGTGGGAAGAACGTATTAAGCAACTTATAGGATCAGACTCCCTCAAATTAGCTGTATATTGCAAAACTGCTT
TAAACAAAGCAGAAATTACAATTGGATAA

Upstream 100 bases:

>100_bases
TAACCTCAATAGAATTGCCATCTAATTTATCATCAATGAAATTGATTTTGAGCAATCACTCTGGACAATCCCATCAAGCC
ATACCAAAAATGCGCTGGTT

Downstream 100 bases:

>100_bases
AAATTCATGATAAAAAATCTAATTACACAACAAGAAGGAAAAACACTCGAGTTTAAGAGAGATTTATCATCACCAAAATC
ACTACTTAAATCTATCGTTG

Product: integrase of prophage CP-933C

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase-Like Protein; Phage Integrase Family Site-Specific Recombinase; Integrase Of Prophage; Integrase Family Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKIHLTPLTQSLFELLKAETNSSFVIPGLNDEEPLTDKAIAKAVSRIQTRVGIPHWTAHDLRRTFATQLGEALHVDPVVI
EKCLGHKMPKIMATYNKNEMLPQRKEALIRWEERIKQLIGSDSLKLAVYCKTALNKAEITIG

Sequences:

>Translated_142_residues
MKIHLTPLTQSLFELLKAETNSSFVIPGLNDEEPLTDKAIAKAVSRIQTRVGIPHWTAHDLRRTFATQLGEALHVDPVVI
EKCLGHKMPKIMATYNKNEMLPQRKEALIRWEERIKQLIGSDSLKLAVYCKTALNKAEITIG
>Mature_142_residues
MKIHLTPLTQSLFELLKAETNSSFVIPGLNDEEPLTDKAIAKAVSRIQTRVGIPHWTAHDLRRTFATQLGEALHVDPVVI
EKCLGHKMPKIMATYNKNEMLPQRKEALIRWEERIKQLIGSDSLKLAVYCKTALNKAEITIG

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16027; Mature: 16027

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHLTPLTQSLFELLKAETNSSFVIPGLNDEEPLTDKAIAKAVSRIQTRVGIPHWTAHD
CEEEECHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
LRRTFATQLGEALHVDPVVIEKCLGHKMPKIMATYNKNEMLPQRKEALIRWEERIKQLIG
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
SDSLKLAVYCKTALNKAEITIG
CCCCEEEEEEHHHCCCCEEECC
>Mature Secondary Structure
MKIHLTPLTQSLFELLKAETNSSFVIPGLNDEEPLTDKAIAKAVSRIQTRVGIPHWTAHD
CEEEECHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH
LRRTFATQLGEALHVDPVVIEKCLGHKMPKIMATYNKNEMLPQRKEALIRWEERIKQLIG
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
SDSLKLAVYCKTALNKAEITIG
CCCCEEEEEEHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA