Click here to switch to the map view.

The map label for this gene is 52842729

Identifier: 52842729

GI number: 52842729

Start: 2847611

End: 2847790

Strand: Direct

Name: 52842729

Synonym: lpg2521

Alternate gene names: NA

Gene position: 2847611-2847790 (Clockwise)

Preceding gene: 52842727

Following gene: 52842731

Centisome position: 83.81

GC content: 40.56

Gene sequence:

>180_bases
ATGTTAAGTTGGGCACTTATTTTTTTTATCATTGCAATTATTGCAGCCGCGTTTGGATTTGGCGGCATTGCAGTGGCTGC
TGCTGGAATTGCAAAAATATTATTCTTTCTATTTTTGGTGATGTTTGTCATATTTCTTATTATGGGATTACTCGGGCGTC
GTGGCCCTCCTCCTGTCTAG

Upstream 100 bases:

>100_bases
TCGTTTGCATATTCTTCCCTGATTAACTGTCTTTTGTCTAATTGTAGACCATTATTAGTCTATAATTTAATGAACAGGAT
AATCTTTACAGGGAGCTGTT

Downstream 100 bases:

>100_bases
CAAAAATATGAAGCTCAAACACCTGGTTAAATAGTATAGATTATTGTGATTTTCCACGCATGTCGATATCCCAAATATCG
ACAACAACATTATTTTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MLSWALIFFIIAIIAAAFGFGGIAVAAAGIAKILFFLFLVMFVIFLIMGLLGRRGPPPV

Sequences:

>Translated_59_residues
MLSWALIFFIIAIIAAAFGFGGIAVAAAGIAKILFFLFLVMFVIFLIMGLLGRRGPPPV
>Mature_59_residues
MLSWALIFFIIAIIAAAFGFGGIAVAAAGIAKILFFLFLVMFVIFLIMGLLGRRGPPPV

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009760 [H]

Pfam domain/function: PF07043 DUF1328 [H]

EC number: NA

Molecular weight: Translated: 6285; Mature: 6285

Theoretical pI: Translated: 12.51; Mature: 12.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSWALIFFIIAIIAAAFGFGGIAVAAAGIAKILFFLFLVMFVIFLIMGLLGRRGPPPV
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSWALIFFIIAIIAAAFGFGGIAVAAAGIAKILFFLFLVMFVIFLIMGLLGRRGPPPV
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA