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The map label for this gene is ddpX [H]

Identifier: 52842657

GI number: 52842657

Start: 2761307

End: 2762032

Strand: Direct

Name: ddpX [H]

Synonym: lpg2449

Alternate gene names: 52842657

Gene position: 2761307-2762032 (Clockwise)

Preceding gene: 52842655

Following gene: 52842658

Centisome position: 81.27

GC content: 38.29

Gene sequence:

>726_bases
TTGTCGAATCCATGTAATAAAATTTTGCTTGTTTTGCGAAAAATAATGAAACCCATAGCACATATCGCAGATAAAGAAAT
AATATCTATCCCTGTTAAAGAATGCGGCGAAGAGCTCATTGATCTTAAAAACCAAAATATTATTGTTTACGGGCCCCCTC
CAGAAACCCCTTTAACCGCAAATGACTACACCAAAATACGTAAAACCGTATATCAAAAATTATGTTTGGCACAAAATGAC
CTGCCCAATGGCTGGCGTTTTAGACTATATGAAGGATTACGCAGTCTGGCTGTTCAGGAAATTCTGTTTAACCAACAACG
TGATAACCTACGTCAAAGCAAAGAGTACGATTCCTATGAGGATTTATTTAATGAAACCTGTCGTCTGGTTTCTCCAGTAG
TCCATTTGGATGGGACAGCTAATATACCACCACATAGCACCGGGGCCGCAATCGACATTGAGCTCATTGATAGCTATGGC
AATCTGATTAATCTTGGAATGGCTGCAAAGGACTGGTTAATTGTTGATCCTGATTTAAGTGAAACCTATTCAAAACTTAT
TTCTGAAGAAGCTATGCAAAATCGTATTCTGATGCTGAAAATAATGGCTAAGCATGGTTTTGTTAATTACCCCAGAGAAT
GGTGGCATTTTTCCTATGGAGATCGCCTATGGGCCTATATGACAGAACATTCTACTGCCATCTATGGTGCTATCATAAAT
AATTAA

Upstream 100 bases:

>100_bases
ATTGCAGATTGTTAGGTTTTATCAGAAAAATTTTAAATAATTAAAGCATAAGGCCTAACCTGCTTTTTTGTTAGCATGAT
ATAATTAATGTGCGGATAAC

Downstream 100 bases:

>100_bases
GCCAATGCGGCAATGCCTGCCATTCTTGAACTGGGCTAATTATTTGATTATTCTGTCAATATTACCTTAAAGAATATCTC
TTATGACCCCATCTATTTCG

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSNPCNKILLVLRKIMKPIAHIADKEIISIPVKECGEELIDLKNQNIIVYGPPPETPLTANDYTKIRKTVYQKLCLAQND
LPNGWRFRLYEGLRSLAVQEILFNQQRDNLRQSKEYDSYEDLFNETCRLVSPVVHLDGTANIPPHSTGAAIDIELIDSYG
NLINLGMAAKDWLIVDPDLSETYSKLISEEAMQNRILMLKIMAKHGFVNYPREWWHFSYGDRLWAYMTEHSTAIYGAIIN
N

Sequences:

>Translated_241_residues
MSNPCNKILLVLRKIMKPIAHIADKEIISIPVKECGEELIDLKNQNIIVYGPPPETPLTANDYTKIRKTVYQKLCLAQND
LPNGWRFRLYEGLRSLAVQEILFNQQRDNLRQSKEYDSYEDLFNETCRLVSPVVHLDGTANIPPHSTGAAIDIELIDSYG
NLINLGMAAKDWLIVDPDLSETYSKLISEEAMQNRILMLKIMAKHGFVNYPREWWHFSYGDRLWAYMTEHSTAIYGAIIN
N
>Mature_240_residues
SNPCNKILLVLRKIMKPIAHIADKEIISIPVKECGEELIDLKNQNIIVYGPPPETPLTANDYTKIRKTVYQKLCLAQNDL
PNGWRFRLYEGLRSLAVQEILFNQQRDNLRQSKEYDSYEDLFNETCRLVSPVVHLDGTANIPPHSTGAAIDIELIDSYGN
LINLGMAAKDWLIVDPDLSETYSKLISEEAMQNRILMLKIMAKHGFVNYPREWWHFSYGDRLWAYMTEHSTAIYGAIINN

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 27700; Mature: 27569

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPCNKILLVLRKIMKPIAHIADKEIISIPVKECGEELIDLKNQNIIVYGPPPETPLTA
CCCHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHCCCCCCEEEECCCCCCCCCC
NDYTKIRKTVYQKLCLAQNDLPNGWRFRLYEGLRSLAVQEILFNQQRDNLRQSKEYDSYE
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DLFNETCRLVSPVVHLDGTANIPPHSTGAAIDIELIDSYGNLINLGMAAKDWLIVDPDLS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHCCCCEECCCCCCCCEEECCCHH
ETYSKLISEEAMQNRILMLKIMAKHGFVNYPREWWHFSYGDRLWAYMTEHSTAIYGAIIN
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCEEEEEEEC
N
C
>Mature Secondary Structure 
SNPCNKILLVLRKIMKPIAHIADKEIISIPVKECGEELIDLKNQNIIVYGPPPETPLTA
CCHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHCCCCCCEEEECCCCCCCCCC
NDYTKIRKTVYQKLCLAQNDLPNGWRFRLYEGLRSLAVQEILFNQQRDNLRQSKEYDSYE
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DLFNETCRLVSPVVHLDGTANIPPHSTGAAIDIELIDSYGNLINLGMAAKDWLIVDPDLS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHCCCCEECCCCCCCCEEECCCHH
ETYSKLISEEAMQNRILMLKIMAKHGFVNYPREWWHFSYGDRLWAYMTEHSTAIYGAIIN
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCEEEEEEEC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]