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The map label for this gene is 52842626

Identifier: 52842626

GI number: 52842626

Start: 2729291

End: 2730136

Strand: Direct

Name: 52842626

Synonym: lpg2417

Alternate gene names: NA

Gene position: 2729291-2730136 (Clockwise)

Preceding gene: 52842625

Following gene: 52842627

Centisome position: 80.33

GC content: 34.4

Gene sequence:

>846_bases
ATGATAAAAGATGTCTTTTCCTCTTCATTTTACTTCCTATTTTTTTATTTCATGATAATTTATTCTCTTGATTGTAAGTA
TGAATTTTCAATTATTGTGAACAAAAAAAGGGCGACTGTGTATACATGCATTAGATTTGGAATAACCTCGATAGTTCTTC
TTGCAATATGTTCGGTCCCTTCTTATGGCACACCAATATTTCGTGATCATAGCCTGACTCTATCAGGCCTTATTGGTTAT
ACGGATTTCAAAGATCCTGTCGATCAACAGTTGGTAATCAGTCACTATGTCACTGATTTACTGACTAATTCTCATAAACA
TACTCACCCAAGCGTATTAATTTCTGCCAAGCAACAATTGAATTTTGAAGCCAATAAGATTCATAAAATCATGCTGGGTC
CTGCATTGTATTTTCAAAAACTGCATTATTCTGGCGATGTGTGGGAATTAATGTTACCTGAGTTCTATAATTACCAATAT
GATTATACAAGTAATAATGTTAACTTTTTAATAGAAGGAGACCTATATTTTAATCCTATATCTACTTGGCTTATTTCTTT
TGTCACTGCTGGTTTAGGATATGGGGTTGCTTATATTCACTATGACGATTATGCCCTTCCTGGTATTGATCCTGTAAGTG
AGCGACATCACTTTGACTCTTCTATCAAAGGAATTTATCAATTGGGAGCAGGCCTTGCGGTACCAGTCAATCCTAATTGG
TCAATTAACTTACGCTATGCCTATATTCATATGGGCAAAGTCCATACTTCTCCTAACTCCCTTGGGCCTATAGAACTTGT
TTTAAACAATCAAAACATACTGATAGGAATTAATTACTCGATATAA

Upstream 100 bases:

>100_bases
AAGATGTTTCAATTGATTTTATTTAATACTTTATAAAAATCCTGGGCTACAAGAAGAATACTTGTTGTGACTGATAGAGT
ATTAATACTGAATTCTTGAT

Downstream 100 bases:

>100_bases
CTCAGGCCAAATATGAAAAAGACCGGTTATTTATTAATGTTTGTATTAGTTGCATGCTTGTGTAATCAGAAAATAGTGGC
AGCCATCCCCCTGGTTGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIKDVFSSSFYFLFFYFMIIYSLDCKYEFSIIVNKKRATVYTCIRFGITSIVLLAICSVPSYGTPIFRDHSLTLSGLIGY
TDFKDPVDQQLVISHYVTDLLTNSHKHTHPSVLISAKQQLNFEANKIHKIMLGPALYFQKLHYSGDVWELMLPEFYNYQY
DYTSNNVNFLIEGDLYFNPISTWLISFVTAGLGYGVAYIHYDDYALPGIDPVSERHHFDSSIKGIYQLGAGLAVPVNPNW
SINLRYAYIHMGKVHTSPNSLGPIELVLNNQNILIGINYSI

Sequences:

>Translated_281_residues
MIKDVFSSSFYFLFFYFMIIYSLDCKYEFSIIVNKKRATVYTCIRFGITSIVLLAICSVPSYGTPIFRDHSLTLSGLIGY
TDFKDPVDQQLVISHYVTDLLTNSHKHTHPSVLISAKQQLNFEANKIHKIMLGPALYFQKLHYSGDVWELMLPEFYNYQY
DYTSNNVNFLIEGDLYFNPISTWLISFVTAGLGYGVAYIHYDDYALPGIDPVSERHHFDSSIKGIYQLGAGLAVPVNPNW
SINLRYAYIHMGKVHTSPNSLGPIELVLNNQNILIGINYSI
>Mature_281_residues
MIKDVFSSSFYFLFFYFMIIYSLDCKYEFSIIVNKKRATVYTCIRFGITSIVLLAICSVPSYGTPIFRDHSLTLSGLIGY
TDFKDPVDQQLVISHYVTDLLTNSHKHTHPSVLISAKQQLNFEANKIHKIMLGPALYFQKLHYSGDVWELMLPEFYNYQY
DYTSNNVNFLIEGDLYFNPISTWLISFVTAGLGYGVAYIHYDDYALPGIDPVSERHHFDSSIKGIYQLGAGLAVPVNPNW
SINLRYAYIHMGKVHTSPNSLGPIELVLNNQNILIGINYSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32095; Mature: 32095

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDVFSSSFYFLFFYFMIIYSLDCKYEFSIIVNKKRATVYTCIRFGITSIVLLAICSVP
CCCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
SYGTPIFRDHSLTLSGLIGYTDFKDPVDQQLVISHYVTDLLTNSHKHTHPSVLISAKQQL
CCCCCEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHC
NFEANKIHKIMLGPALYFQKLHYSGDVWELMLPEFYNYQYDYTSNNVNFLIEGDLYFNPI
CCCHHHEEEEEECHHHHHHHHCCCCCEEEEECHHHHCCEEEEECCCEEEEEECCEEECHH
STWLISFVTAGLGYGVAYIHYDDYALPGIDPVSERHHFDSSIKGIYQLGAGLAVPVNPNW
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHCCCEEEECCCCE
SINLRYAYIHMGKVHTSPNSLGPIELVLNNQNILIGINYSI
EEEEEEEEEEEEEEECCCCCCCCEEEEECCCEEEEEEEECC
>Mature Secondary Structure
MIKDVFSSSFYFLFFYFMIIYSLDCKYEFSIIVNKKRATVYTCIRFGITSIVLLAICSVP
CCCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
SYGTPIFRDHSLTLSGLIGYTDFKDPVDQQLVISHYVTDLLTNSHKHTHPSVLISAKQQL
CCCCCEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHC
NFEANKIHKIMLGPALYFQKLHYSGDVWELMLPEFYNYQYDYTSNNVNFLIEGDLYFNPI
CCCHHHEEEEEECHHHHHHHHCCCCCEEEEECHHHHCCEEEEECCCEEEEEECCEEECHH
STWLISFVTAGLGYGVAYIHYDDYALPGIDPVSERHHFDSSIKGIYQLGAGLAVPVNPNW
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHCCCEEEECCCCE
SINLRYAYIHMGKVHTSPNSLGPIELVLNNQNILIGINYSI
EEEEEEEEEEEEEEECCCCCCCCEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA