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The map label for this gene is 52842624

Identifier: 52842624

GI number: 52842624

Start: 2727588

End: 2727779

Strand: Reverse

Name: 52842624

Synonym: lpg2415

Alternate gene names: NA

Gene position: 2727779-2727588 (Counterclockwise)

Preceding gene: 52842628

Following gene: 52842623

Centisome position: 80.28

GC content: 39.06

Gene sequence:

>192_bases
ATGTTATATTGGGCCTTAATTTTTCTTATTGTTGCAATTGTCGCAGGTTTATTTGGATTTAGAGGGGTAGCATCAGCCGC
AACAGGGATAGCTAAAGTTCTGTTCTTCCTCTTTATCGTAATGTTTATTGTGCTTTTGGTCTTTAGTCTTTTGGGTGGCA
CACCAGAGCCTGTTGTCATTGTAAAACCATAG

Upstream 100 bases:

>100_bases
GTTTTTATAAGTGAGATGAGCAAAAACAGATGGATCTGATTTTGCTCTGGTAAAAACAATTCAGGAAGAACTTATTATTC
TGAAAGACAGGGAGTTTATC

Downstream 100 bases:

>100_bases
CTACATCCTATATAAGTCCTCTTAATGATGTATTTTGTTGTTTTAATTGATAATCAAGCTGCTTTTACGGAAAGAATTGA
AACAGTCGTTGAAGTAGCTT

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MLYWALIFLIVAIVAGLFGFRGVASAATGIAKVLFFLFIVMFIVLLVFSLLGGTPEPVVIVKP

Sequences:

>Translated_63_residues
MLYWALIFLIVAIVAGLFGFRGVASAATGIAKVLFFLFIVMFIVLLVFSLLGGTPEPVVIVKP
>Mature_63_residues
MLYWALIFLIVAIVAGLFGFRGVASAATGIAKVLFFLFIVMFIVLLVFSLLGGTPEPVVIVKP

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2415_LEGPH (Q5ZSV1)

Other databases:

- EMBL:   AE017354
- RefSeq:   YP_096423.1
- STRING:   Q5ZSV1
- GeneID:   3080202
- GenomeReviews:   AE017354_GR
- KEGG:   lpn:lpg2415
- NMPDR:   fig|272624.3.peg.870
- eggNOG:   NOG121247
- OMA:   WIITFLI
- BioCyc:   LPNE272624:LPG2415-MONOMER
- HAMAP:   MF_01361
- InterPro:   IPR009760
- PIRSF:   PIRSF036466

Pfam domain/function: PF07043 DUF1328

EC number: NA

Molecular weight: Translated: 6772; Mature: 6772

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf9a793c)-; HASH(0xff475b8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYWALIFLIVAIVAGLFGFRGVASAATGIAKVLFFLFIVMFIVLLVFSLLGGTPEPVVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VKP
ECH
>Mature Secondary Structure
MLYWALIFLIVAIVAGLFGFRGVASAATGIAKVLFFLFIVMFIVLLVFSLLGGTPEPVVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VKP
ECH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA