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The map label for this gene is yggW [H]

Identifier: 52842564

GI number: 52842564

Start: 2658127

End: 2659254

Strand: Direct

Name: yggW [H]

Synonym: lpg2354

Alternate gene names: 52842564

Gene position: 2658127-2659254 (Clockwise)

Preceding gene: 52842561

Following gene: 52842566

Centisome position: 78.23

GC content: 38.56

Gene sequence:

>1128_bases
ATGCTTCCGTTATCCTTGTACATTCATATTCCCTGGTGCATCAGAAAATGCCCATACTGTGATTTTAACTCACACAAAAG
CCCTGATGTTTTACCCGAACACCAGTATATTCAGGCTTTGATTGAAGACCTTAAAACGGATATTTCCTCATACAATACCC
GTGAAATTAACTCCATTTTTATTGGTGGCGGCACACCCAGTTTATTTTCAGCCGAAGCTTATAACAACTTATTTAATGAA
TTAAAGCGCATACTCCCCTTTGCAAAAAATATTGAAATTACAATGGAAGCCAATCCCGGTACTGTAGAACAACATCGATT
TACTGATTATAGACAATCAGGAATCAATCGTCTTTCTTTGGGAATTCAAAGCTTTAATCCCAATCATTTAAAAATTCTTG
GCCGTATTCATGACGAGAAACAAGCCCATTCTGCTATAGATACTGCCCGTAAAGCCGGCTTTGATAATCTCAATCTTGAT
ATCATGCACAGTTTACCCAATCAAAGTGTAACGCAGGGATTACAGGATCTTAAGACCGCTTTATCCTATCAACCTGAGCA
TTTATCCTGGTATCAATTAACCATAGAACCGAATACTGTATTTTACAAGCATACTCCTCCCCTACCTTCTGAAGAAGAAG
ATTACTTGCTGGAGGAACAAGGATTTGCCCTGTTACATAATTCCGGATATCACCGCTATGAAATTTCTGCCTTTTCCAAA
CCGGAAAAGCAAGCCAGACACAATATCAATTATTGGCTATTCGGTGATTATTTGGGTATAGGCGCTGGTGCTCATGGAAA
AATGACAACCCCAAACGCAATAATAAGAACCCGTAAGCACCGTCAACCCAAAGATTATCTGGATAATGAGAAACCTTATC
TGGCTGCTTGCGAAACCATTACAGGTAAAGAATTGTTGTTTGAGTTTATGCTGAATACAACCCGGTTGGAACAATCCATA
CCTTTAGACTTATTTACGACAACGACAGGATTGGAACTTAATCAGCTTTTACCCTTGCTGAAATTAGCTAATAAGAAACA
ATTGATTAATTTAACAGATACTCATTGGCAAGTAACACCATTAGGCAGGCAATATACTAATGATTTGCAAGCCTTGTTTC
TGCCCTAG

Upstream 100 bases:

>100_bases
ATTTTGGTTTATTTCGCATCAATGGTCATCACTTAATTTTGTAGCAAAATTGCTATCATGATACTATCGCATTCCCTAAC
AAGCCAGTTTAAAAATTGTA

Downstream 100 bases:

>100_bases
TTCGCTGTTTCAAAAATTATTGATTCTTGCTTCATTGCAGAGAGTGGATTAGAGAAGGGGGTTTATATCCCCCCATTAAT
TGCTCAACGCGTTCTGCAAC

Product: (oxygen-independent) coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLPLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIGGGTPSLFSAEAYNNLFNE
LKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLD
IMHSLPNQSVTQGLQDLKTALSYQPEHLSWYQLTIEPNTVFYKHTPPLPSEEEDYLLEEQGFALLHNSGYHRYEISAFSK
PEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKPYLAACETITGKELLFEFMLNTTRLEQSI
PLDLFTTTTGLELNQLLPLLKLANKKQLINLTDTHWQVTPLGRQYTNDLQALFLP

Sequences:

>Translated_375_residues
MLPLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIGGGTPSLFSAEAYNNLFNE
LKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLD
IMHSLPNQSVTQGLQDLKTALSYQPEHLSWYQLTIEPNTVFYKHTPPLPSEEEDYLLEEQGFALLHNSGYHRYEISAFSK
PEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKPYLAACETITGKELLFEFMLNTTRLEQSI
PLDLFTTTTGLELNQLLPLLKLANKKQLINLTDTHWQVTPLGRQYTNDLQALFLP
>Mature_375_residues
MLPLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIGGGTPSLFSAEAYNNLFNE
LKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLD
IMHSLPNQSVTQGLQDLKTALSYQPEHLSWYQLTIEPNTVFYKHTPPLPSEEEDYLLEEQGFALLHNSGYHRYEISAFSK
PEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKPYLAACETITGKELLFEFMLNTTRLEQSI
PLDLFTTTTGLELNQLLPLLKLANKKQLINLTDTHWQVTPLGRQYTNDLQALFLP

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=281, Percent_Identity=33.4519572953737, Blast_Score=184, Evalue=9e-47,
Organism=Escherichia coli, GI1789325, Length=373, Percent_Identity=47.1849865951743, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI87082341, Length=395, Percent_Identity=25.3164556962025, Blast_Score=121, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43038; Mature: 43038

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIF
CCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
IGGGTPSLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSL
ECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEE
GIQSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTA
EHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH
LSYQPEHLSWYQLTIEPNTVFYKHTPPLPSEEEDYLLEEQGFALLHNSGYHRYEISAFSK
HCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCCCEEEEECCCCCEEEECCCCC
PEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKPYLAACETI
CHHHHHCCCCEEEEECEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCEEEEECCC
TGKELLFEFMLNTTRLEQSIPLDLFTTTTGLELNQLLPLLKLANKKQLINLTDTHWQVTP
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEE
LGRQYTNDLQALFLP
CCHHHHCCCCEEECC
>Mature Secondary Structure
MLPLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIF
CCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
IGGGTPSLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSL
ECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEE
GIQSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTA
EHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH
LSYQPEHLSWYQLTIEPNTVFYKHTPPLPSEEEDYLLEEQGFALLHNSGYHRYEISAFSK
HCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCCCEEEEECCCCCEEEECCCCC
PEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKPYLAACETI
CHHHHHCCCCEEEEECEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCEEEEECCC
TGKELLFEFMLNTTRLEQSIPLDLFTTTTGLELNQLLPLLKLANKKQLINLTDTHWQVTP
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEE
LGRQYTNDLQALFLP
CCHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]